Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00564 ATGAGAGGATTATTGAACCCCCCAGCCCTGGTGATGTTGATGGTTCAAGTTATCATAGCTTCAGTCAGTGTGCTATACAAAGTGGCTGTTAATGATGGAACGAGCATAAGTGTCCTCACAGCTTATCGTCTCATTTTTGCAGCAGCTATCACTATTCCACTCGCTTTCATTTTTGAAAGGCAGAACAGACCCAAGCTGACTTCTACATATGCTTCCGCTATTTTTAATCTCAGTCCCGCCGTCACTTTTATCTTGGCTGTCTCTTTTCGTCTTGAAAGATTGAATTTTGACACGGCGGCGGGCATGGCAAAGGTGTTAGGAACAATAACAGCAGCTGGAGGGGCAATGCTACTGACATTTCTCAAAGGCGTTGAAGTTAAAATTTGGACCTTCCACATTAACCTTTTGCATAAAGAAAAAAGTGGAACACTAAATGGCGACGGTGGTAGCAAATTGCTGGGTATTTTTTTGGGTATTGGAAGCTGCATCAGTTATGCAATGTGGCTCATCATTCAGGCTAAGATGAACAGAGAATACCAAGGACATTATTCCAGCACAGCTTTAATGTGTCTAGCAGGGGCAATTCAAGCAACTGTTTACGCCCTTTGTGTTGAGAAGGATTTGAGCCAATGGAGGTTGTGTTGGAATATTAAACTTCTAACTGCTGCATACACGGGAATTGTGGGTACCGGAATAAATTTTATTCTAATTACATGGTGTGTAGTGATGAGAGGTCCGCTATTCGCCTCTGTTTTCAATCCTCTATTGCTTGTCATTGTGGCAATTGTTGGTTCACTTATGCTTGATGAGAAGTTATATTTAGGAAGTGTAATTGGAGCATCGCTAATAATGATTGGACTGTACGTGATATTATGGGGTAAGAACAAAGAAATGAAAAGTGATTTAGAAATCACTTCAGAGATTGAAGCTGTTGTCACGTCCACACAGTAG 951 0.4132 MRGLLNPPALVMLMVQVIIASVSVLYKVAVNDGTSISVLTAYRLIFAAAITIPLAFIFERQNRPKLTSTYASAIFNLSPAVTFILAVSFRLERLNFDTAAGMAKVLGTITAAGGAMLLTFLKGVEVKIWTFHINLLHKEKSGTLNGDGGSKLLGIFLGIGSCISYAMWLIIQAKMNREYQGHYSSTALMCLAGAIQATVYALCVEKDLSQWRLCWNIKLLTAAYTGIVGTGINFILITWCVVMRGPLFASVFNPLLLVIVAIVGSLMLDEKLYLGSVIGASLIMIGLYVILWGKNKEMKSDLEITSEIEAVVTSTQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00564 316 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 296 - -
Trre2g00564 316 PANTHER WAT1-RELATED PROTEIN 8 301 IPR030184 GO:0016020|GO:0022857
Trre2g00564 316 Pfam EamA-like transporter family 153 291 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00564 Trre-Chr2 4607780 4609733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00564 12 316 Nodulin-like Gene Family AT1G68170 39.286 9.36e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00564 - - gmx:100809587 362.459