Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00560 ATGATGCACATGACACTATATTGGGGAAAAAACGTGACACTGTTATTTGATTCATGGAAGACCGATTCATGGACGAGTTATATACTGAGTTTAATCGCGTGTTTCTTGATTGCTACTTTCTACCAATATCTGGAGAATATTCGGATTCGGCTGAAGTTTTTTTCCGGCGAGGGTAGGGGTGGTTCTACGGTGCCGGAGATTCAGACTCCTCTTCTGCAGTTGAATAAGGTTTCTAGAAATAAGGAGTCAGGGTGA 255 0.4235 MMHMTLYWGKNVTLLFDSWKTDSWTSYILSLIACFLIATFYQYLENIRIRLKFFSGEGRGGSTVPEIQTPLLQLNKVSRNKESG 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00560 84 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 50 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre2g00560 84 Pfam Ctr copper transporter family 4 51 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00560 Trre-Chr2 4574459 4574844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00560 1 60 Inorganic Solute Cotransporters AT5G20650 65.000 1.86e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00560 K14686 - gmx:100795071 110.538