Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre2g00530 | ATGAATGTACGCAAGGGTTCAACAGTTTGGGTTTCAGATAAGGAATTAGCTTGGATACCTGCTGAAGTAATCGATTCCGATGATAAATTTGTTCAGATTGTAACTGGTTCTGGCAAGAAGGTTTTTGTTTCCGCGGAGAAATTGTGTCCGAGAGATGCGGATGAAGATGAGCTTGGTGGATTTGAAGATATGACGAGATTGACTTACTTGAATGAACCAGGAGTGTTGTATAATATTCGTAGGAGATATGCACTTAATGATATTTACACATATACAGGGAGCATTTTAATAGCCGTTAATCCCTTCACAAAGCTTCCTCATTTGTATGATAGTCATATGATGGAGCAGTATAAGGGAGCTCCATTGGGTGAGCTTAGCCCACATGTTTTTGCTGTTGCAGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGTCAATCTATCTTGGTAAGCGGTGAAAGTGGCGCTGGCAAAACTGAGACAACAAAATTGATTATGCAATATCTTACTTTTGTTGGTGGCCGTACCGGTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATAGAAATGGTAGAATATCTGGTGCTGCAATCAGAACTTACTTATTAGAAAGATCACGAGTTGTGCAGATAAAGGATCCCGAAAGAAATTATCACTGCTTCTATCAGTTGTGCGCCTCTGAAAGGGATGCAGAGGAGTATAAGTTAGGACATCCAAGTCATTTCCACTATTTAAATCAAAGTAAAATCTATGAACTAAACGGTGTAAGCAATGCTGAAGAATACATGAGGACTAGGAGGGCAATGGATATTGTCGGCATCAGTCATGGGGATCAGGAAGCCATATTTCGCGTCTTAGCTTCAATTTTGCACTTGGGAAATGTTGAATTTTCTCCTGGAAAAGAGCATGACTCATCAGCAATAAAGGATGAAAAATCAAGATTTCATATGCAGATGGCCGCCGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACGTTGTGTACTCGATCGATACAAACTCGAGAAGGAAATATTATCAAGGCCCTTGATTGTAATGCTGCTGTTGCTGGTCGGGATGCTTTGGCAAAAACTGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTTGGACAAGATATCAATTCCCCGATGCAAATTGGAGTCTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAATAGTTTTGAGCAATTCTGTATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAAGAGGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTGGACAACCAAGATGTTCTAGATTTGATCGAAAAGAAACCCATTGGTGTCATTGCTCTGTTGGATGAAGCTTGCATGTTTCCAAAATCAACACATGAAACATTCTCTACTAAGTTGTTTCAGCATTTCCGGTCTCACCCTAGGTTGCAAAAGGAAAAGTTTTCACAAACAGATTTTATAGTTTCTCATTATGCTGGAAAGGTCACTTATCATACAGATACCTTTTTGGATAAAAATCGTGACTATGTTGTTGTAGAACATTGTAATCTATTTTCTTCTTCAAATTGCCCTTTTGTGTCTGGTCTTTTCCCTTCGCTACCAGAGGAATCTTCAAGATCATCATACAAGTTTTCTTCGGTGGCTACCAGATTTAAGCAACAACTGCAATCACTCATGGAGACCCTCAAGTCAACAGAGCCTCATTACATACGATGTGTGAAGCCAAATTCATTGAATCGACCACAAATGTTTGAGAATGCGAGCATCATACACCAATTACGCTGTGGGGGTGTCCTTGAAGCTATTCGGATAAGTCTGGCAGGTTATCCCACTCGAAGAACATATTCAGAGTTTGTAGATCGCTATGGATTAATAGGCCCTGAGATTTTGGATGGAAGTTATTATGATGATAAAGCTGCAACTGAGAAAATTTTACATAAGCTCAAGCTTGATAATTTTCAGTTGGGCAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGTGTTTTGGACTCCAAACGTACTGAGGTTTTGGACAACGCGGCTAAGTGTATTCAGTGCCAACTGAGGACATTTATTACACGCAGGCATTTCATTTCAGTTAGAGCAGCTGCAGTGTCTCTTCAGGCATGCTGCAGGGGATACATTGCCCAGAAGATGTATGCAGCTAAAAGGGAAACAGCAGCAGCTATCACAGTGCAAAAGTATATACGTATGTGGCTAACGAGGCATGCACACATGAAATTATATTCTTCTGCTATTATCATACAATCGCATGTTCGAGGTTTCATTACTCAACAAAGATTTTTACATGGAAAAGAACATAGAGCCGCTATATCTATTCAGGCCTGTTGGAGGATGTACAAGGTTAGGTCAGCTTTCCAGCGATATCTTGCTTCAGTTGTGGCAATACAATGTCTATGGCGGTGTAGACAAGCAAAAAGGGAGTTTCGCAGACTTAAACAAGAGGCTAATGAAGCTGGTGCCCTCCGTCTGGCTAAAACTAAACTTGAGAAGCAAATGGAAGAGCTCACATGGCGTTTGCACCTAGAAAAGAAAATAAGGGTTTCTAATGAAGAAGCCAAACAAAGAGAGAATTCTGCACTTCGAAAAATGTTAGAAGCTGTGAATCTTGAATTAGATGCGGCAAAATTGGCTACAATCAATGAGTGCAACAAGAATGCTGTTCTGCAAAATCAATTGGAATTGTCAGCCAAGGAAAAATCTGCTTTAAAGAGAGAGCTAGTTTCTGTGGATGAATTACGAAAGGAAAATGCTATGCTAAAGTTTGCACTGGATTCCTTTGAGAAAAAGTACACATCTTTAGAGCTTGAATATATAAATGCTCAAAAAGGCCAAGACGAAACCATTGAGAAACTGAGGGGATTTGAAGAGAAGTGTTCTCAGCTCGAGCAAAATGTGAAAAGCCTTGAGGAAAAGCTATTGAGTTTGGAGGATGAAAATCACGTGCTTCGTCAGAAAGCCTTAAGTGCTCCTCGAAAGAGTAATCGCCCGAGTTTTGCAAAGTCGTTTTCAGAAAAATACTCAACTCCGATAGCCTCCCGCACTGAGCGAAAGCCCATATTTGAAACACCCACACCCACAAAAACTACTGCTACTTTTACGCCAGGCATGTCAGACTCTCATCGATCTAAGCCAACAGCAGAGAGGAACCAGGACAATTATGAATTCCTCTCTAGGTGTATCAAAGAGAATTTGGGATTCAAAAATGGTAAACCTATTGCAGCTCGCATCATATACAAATGTCTTCTTCACTGGCATGCTTTTGAATCTGAGCGCACAGCCATTTTTGATAACGTTATTGAAGGCATAAATGACGCTCTAAAGGTTAGGGAAGATGACATAGTCTTGCCATATTGGCTGTCCAATACTTCTGCTCTTCTATGCCTCTTACAAAGGAACTTACGTTCAAATGGCTTTTTAGCTACAAATGGTCAACGTTATACTGGATCGTCTGGCTTGACCAGCAGAACTGGGCATGGACCAAAATCTCCATTGAAGTTTATTGGATATGATGATGGTATGTCTCATGTGGAGGCAAGATATCCAGCTATACTTTTCAAGCAACAACTAACTGCATGTGTTGAGAAAATTTTTGGGCTTCTACGTGATAATTTGAAAAAAGAACTTTCACCACTTCTGCAGTTATGTATTCAGACACCCAAAACAGGAAGAACACACGGGGGAAAATCATCTAGATCTCCTGTTGGTCTTTCTCAACAATCATCTGGTAGTCAGTGGAGCAACATTGTCAAATTTTTGGATTCACTCATGAGCAAACTTCGTGGAAATCATGTGCCATCCTTCTTCATTCGTAAACTAGTTACCCAAGTTTTTCACTTCATCAATATTACACTCTTCAACAGTCTTCTTTTACGTCGTGAATGTTGCACATTCTCAAATGGTGAATATATGAAATCTGGTCTCTCAGAGCTGGAGAAATGGATAGCCAATGCAAAGGAGATGTATGCAGGAACATCTTGGCACGAGTTGAATTATATAAGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAAAAAGTCATTGGAAGAGATTCGACAGGATCTTTGTCCGGCATTGACTGTCAGACAAATCTATCGAATAAGTACTATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGTAGTTAGTGTAATGAGGGAAATTGTTAACAAGGACAATCAGAATATGCCCTCTAATTCTTTCCTATTGGATGATGATCTGAGCATTCCTTTCTCTGCCGAAGATGTAGATAAGGCAATCCCTCCTATAGATCTGGACAAGATTGATCTCCCAGTATTCGTGTCAGAATATTCTTGTGCCCAGTTTCTTAATCCACATCAAAATAGATTGGTCGTCACCGAAGCTTGA | 4575 | 0.3989 | MNVRKGSTVWVSDKELAWIPAEVIDSDDKFVQIVTGSGKKVFVSAEKLCPRDADEDELGGFEDMTRLTYLNEPGVLYNIRRRYALNDIYTYTGSILIAVNPFTKLPHLYDSHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRTGGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDRNGRISGAAIRTYLLERSRVVQIKDPERNYHCFYQLCASERDAEEYKLGHPSHFHYLNQSKIYELNGVSNAEEYMRTRRAMDIVGISHGDQEAIFRVLASILHLGNVEFSPGKEHDSSAIKDEKSRFHMQMAADLFMCDVDLLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDINSPMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGVIALLDEACMFPKSTHETFSTKLFQHFRSHPRLQKEKFSQTDFIVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLFSSSNCPFVSGLFPSLPEESSRSSYKFSSVATRFKQQLQSLMETLKSTEPHYIRCVKPNSLNRPQMFENASIIHQLRCGGVLEAIRISLAGYPTRRTYSEFVDRYGLIGPEILDGSYYDDKAATEKILHKLKLDNFQLGRTKVFLRAGQIGVLDSKRTEVLDNAAKCIQCQLRTFITRRHFISVRAAAVSLQACCRGYIAQKMYAAKRETAAAITVQKYIRMWLTRHAHMKLYSSAIIIQSHVRGFITQQRFLHGKEHRAAISIQACWRMYKVRSAFQRYLASVVAIQCLWRCRQAKREFRRLKQEANEAGALRLAKTKLEKQMEELTWRLHLEKKIRVSNEEAKQRENSALRKMLEAVNLELDAAKLATINECNKNAVLQNQLELSAKEKSALKRELVSVDELRKENAMLKFALDSFEKKYTSLELEYINAQKGQDETIEKLRGFEEKCSQLEQNVKSLEEKLLSLEDENHVLRQKALSAPRKSNRPSFAKSFSEKYSTPIASRTERKPIFETPTPTKTTATFTPGMSDSHRSKPTAERNQDNYEFLSRCIKENLGFKNGKPIAARIIYKCLLHWHAFESERTAIFDNVIEGINDALKVREDDIVLPYWLSNTSALLCLLQRNLRSNGFLATNGQRYTGSSGLTSRTGHGPKSPLKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLQLCIQTPKTGRTHGGKSSRSPVGLSQQSSGSQWSNIVKFLDSLMSKLRGNHVPSFFIRKLVTQVFHFINITLFNSLLLRRECCTFSNGEYMKSGLSELEKWIANAKEMYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSVMREIVNKDNQNMPSNSFLLDDDLSIPFSAEDVDKAIPPIDLDKIDLPVFVSEYSCAQFLNPHQNRLVVTEA | 1524 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre2g00530 | 1524 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 308 | 598 | - | - | |
| Trre2g00530 | 1524 | ProSiteProfiles | IQ motif profile. | 757 | 785 | IPR000048 | GO:0005515 | |
| Trre2g00530 | 1524 | Coils | Coil | 865 | 895 | - | - | |
| Trre2g00530 | 1524 | Coils | Coil | 1008 | 1049 | - | - | |
| Trre2g00530 | 1524 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 785 | 879 | IPR027417 | - | |
| Trre2g00530 | 1524 | FunFam | Myosin heavy chain | 249 | 303 | - | - | |
| Trre2g00530 | 1524 | SMART | DIL_2 | 1335 | 1442 | IPR002710 | - | |
| Trre2g00530 | 1524 | CDD | MYSc_Myo11 | 73 | 718 | IPR036018 | - | |
| Trre2g00530 | 1524 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 4 | 53 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Trre2g00530 | 1524 | Gene3D | - | 663 | 731 | - | - |
Showing 1 to 10 of 50 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre2g00530 | K10357 | - | gmx:100790815 | 2612.41 |
Showing 1 to 1 of 1 entries