Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00515 ATGATGTTTATTAATGTAATTTCAAGTGTCCCTTTGTCATCAACAATAATCACTTTGATGGCTTTAATAGGTGGATTATTGGGTTATTTGTATAGGCCATTTTGGAGATTAAGGAAAGTTCCAGGCCCACCTTCTCTTCCTCTTGTAGGACATCTTCCATTACTAGCAAAGTATGGCCCGGATGTGTTCTCAATTCTTGCCAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGACAGCCTCTAATAATCATAGCAGATGCAGAGCTTTGTAAAGAGGTGGGAATAAGAAAATTCAAAGATATTCCAAATAGAAGCATTCCTTCTCCTATCTCTGCTTCTCCTCTTCACCAAAAAGGTTTATTCTTCACAAGGGACTCGCAATGGTCTACGATGAGAAATACCATACTATCAGTATACCAACCATCACACTTAGCAAACTTAGTGCCAAAAATGCAATCATTTATAGAATCAGCAACACAAAATCTTGATGACACCTCAAAAGAAGACATAATCTTTTCCAATCTTTCCCTAAGATTAGCAACAGATGTTATTGGAGATGCAGCATTTGGTGTCAACTTTGGTCTCTCAAATCCTCATTCAATTTGTGAATCAATGAAAAGTGTTAACAATGTAGAACATTCAAGTACTAGTAGTGATGAAGTATCAAATTTCATCAATCAACATATTTACTCCACAACACAACTTAAGATGGATTTGTCTGGTTCATTCTCAATTATAATTGGTTTAATTGCTCCTATACTTCAAGAACCATTTAGACAAATTTTGAAAAGAATAAAGGGCACTATGGATTGGAAAATGGAATGTACTAATAAAAATTTAACCGGTCGTCTTGATGAGATTGTTAAGAAGAGAATGGAAGATAAGAATCGAACTTCAAAGAACTTCTTGTCGCTTATATTAAATGCAAGAGAATCAAAGAGTGTGTCAGAGAGTGTGTTTTCATTTGACTACATAAGTGCTATAACTTATGAACACTTACTTGCCGGCTCGGCTACAACATCCTTTACATTGTCATCTATTGTCTATTTGGTTGCTGGTCACCTAAATGTTGAGAAAAAATTGCTTCAAGAGATTGATGGTTTTGGAACACATGATAGGATACCTAATGCTAAAGATCTTAATGAAAGTTTTCCTTATCTTGATCAGGTAATTAAAGAGGCAATGCGGATTTACACTGTCTCTCCATTGGTTGCAAGAGAAACATCAAGTGAAGTAGAGATAGGAGGTTACCTTCTTCCCAAGGGAACATGGGTATGGTTAGCACTTGGAGTTCTAGCAAAAGATTCAAGAAACTTTGCAGAGCCAGAAAAATTCAAACCAGAGAGGTTTGATCCTAAATGTGAAGAAATGAAAAGAAGGCACCCTTATGCATTCATACCATTTGGAATTGGTCCAAGAGCATGTATTGGCCAGAAATTTTCCATGCAAGAAATCAAGCTTACTTTGATTCATTTATATAGAAAATATGTATTTCGTCATTCACTTAATATGGAAAAACCTCTAGAACTTGAATATGGTATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTTATAAAAAGAACATAA 1599 0.3546 MMFINVISSVPLSSTIITLMALIGGLLGYLYRPFWRLRKVPGPPSLPLVGHLPLLAKYGPDVFSILAKQYGPIYRFHMGRQPLIIIADAELCKEVGIRKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLANLVPKMQSFIESATQNLDDTSKEDIIFSNLSLRLATDVIGDAAFGVNFGLSNPHSICESMKSVNNVEHSSTSSDEVSNFINQHIYSTTQLKMDLSGSFSIIIGLIAPILQEPFRQILKRIKGTMDWKMECTNKNLTGRLDEIVKKRMEDKNRTSKNFLSLILNARESKSVSESVFSFDYISAITYEHLLAGSATTSFTLSSIVYLVAGHLNVEKKLLQEIDGFGTHDRIPNAKDLNESFPYLDQVIKEAMRIYTVSPLVARETSSEVEIGGYLLPKGTWVWLALGVLAKDSRNFAEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSMQEIKLTLIHLYRKYVFRHSLNMEKPLELEYGMVLNFKHGVKLRVIKRT 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00515 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Trre2g00515 532 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 FunFam Cytochrome P450 3A4 27 532 - -
Trre2g00515 532 Pfam Cytochrome P450 41 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 PANTHER THROMBOXANE-A SYNTHASE 14 531 - -
Trre2g00515 532 Gene3D Cytochrome P450 30 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00515 532 SUPERFAMILY Cytochrome P450 32 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00515 Trre-Chr2 4191904 4195114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00515 78 531 Cytochrome P450 AT2G26170 72.026 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00515 K20771 - gmx:100805689 890.567