Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00494 ATGTCAACAATTTTTCATGATTTACGAGAATTCATGACGAACTCGAGCTGCAAAATCAGTGAGTCAGACCCATGTCGTGACGAGTCAACAGCTTTGATTCTAAAATTCGTTGCGATGGCAACAATTCTAGTAACAGGATTTACCGGAATTGCGATACCGTTATTAGGAAACCGACGAGGATTAGGCGAGATATTACCAGCGGCGAAGGCGTTTGCGGCGGGAGTAATACTAGCGACGGGTTTTGTTCACATGCTTAAAGATGCGACGGAAGCATTTAATCACCGGTGTTTGAAATCTTACTCGCACGTGTGGTCGGAGTTTCCTTTTGCCGGTTTTTTCGCTATGGTTTCAGCGTTGTTTACTCTCTTAGTTGACTTTATTGCAACTCAGTATTATGAGAAGAAATCGAGAAAAGGTACACGTGGCAGCAGTGGTGGCTCTGATCACGGTGTAATCGATGATTTGGAGGAGGAGTTGTTGGGATCGGGAATTGTGGAAGTTAAGGATGTTGGGGAAGAGAGGAGTATTGTGGGGATGCATGCTCATGGGTCTCATCATAGACATTCTCATCACCAGAACCATGATGATGATGATGATCAACTGCAACATGGACATGGTCATTCGCATTCTCATTCATTCGGAGAGCATGATGATGATGTGGAAGGTAGCATCCGGCATGTTGTTGTTTCGCAGGTATTGGAACTTGGAATAGTTTCACATTCCATGATAATTGGGTTATCACTAGGAGTTTCACAAAGTCCATGTACAATGAGACCCTTAATTGCAGCATTATCCTTCCACCAATTCTTTGAAGGATTTGCACTTGGTGGTTGCATATCAGAAGCCAAATTCAAGACATCATCAGCAACAATAATGGCATGTTTTTTTGCACTTACAACACCAATTGGTGTTGCAATTGGAACATGTATTGCCTCAAATTTCAATCCTTATAGTCCAGGAGCACTTGTTACAGAAGGTATCCTGGACTCTTTGTCAGCTGGAATTTTAGTGTATATGTCTTTGGTGGATTTAATAGCTGCTGATTTTCATAGTAAGCGAATGCGGTGTAGCTTTCGGCTTCAAATTATTTCTTTTTGTTTGCTTTTCCTTGGGGCTGGATGTATGTCTTCTCTTGCACTTTGGGCATAA 1149 0.4221 MSTIFHDLREFMTNSSCKISESDPCRDESTALILKFVAMATILVTGFTGIAIPLLGNRRGLGEILPAAKAFAAGVILATGFVHMLKDATEAFNHRCLKSYSHVWSEFPFAGFFAMVSALFTLLVDFIATQYYEKKSRKGTRGSSGGSDHGVIDDLEEELLGSGIVEVKDVGEERSIVGMHAHGSHHRHSHHQNHDDDDDQLQHGHGHSHSHSFGEHDDDVEGSIRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIAALSFHQFFEGFALGGCISEAKFKTSSATIMACFFALTTPIGVAIGTCIASNFNPYSPGALVTEGILDSLSAGILVYMSLVDLIAADFHSKRMRCSFRLQIISFCLLFLGAGCMSSLALWA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00494 382 MobiDBLite consensus disorder prediction 181 216 - -
Trre2g00494 382 Pfam ZIP Zinc transporter 33 379 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre2g00494 382 NCBIfam ZIP zinc/iron transport family 17 382 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre2g00494 382 PANTHER ZINC/IRON TRANSPORTER 31 375 - -
Trre2g00494 382 MobiDBLite consensus disorder prediction 190 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00494 Trre-Chr2 4048795 4051425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00494 13 382 Inorganic Solute Cotransporters AT1G10970 61.008 7.85e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00494 K14709 - gmx:100809426 448.358