Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00479 ATGCTGGTGCCAGTTTCTCTCCTTATATTCATCTCTCTTCTTCTCCTACCTCATTCCTCTCTCGCCGTTCGACCTATTCACTCCGATCCGTTCGACTTCCAACTCGCCAACTCAACCGAATCCAACGTCTCCCTCTCCACTCCTCGACAAGGTTCCTTCGCTGACATCATTGATCGTGCTCTTCAGCATGAGTTCACCGACACCGATCAAAACGAAGTGCCTGATGCGGGAGGTTTCAACAACAGTGTAGCAGAACAACAGGCTGTTCTAGAGACTGTGGCCAGAGTCACGCCGAACAAGAATGACACTAAAGATGAAAAGTCATTTCAGCTCCATCATGTATTCAATAGAGGCGAGGACACCCCAATGTTAATAGATCGAAAGGACAATGTATTTATCATTTCTAACTTCAAATCCAAGTATCCAGTGCTGCAGCTAGATTTACGATTGATTTCAGACTTGGTCATTGCTATTGTTTCGGCAACTTGTGGTGGTGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACTGGATATCTTCTAGCTGGCTCCATTGTTGGACCTGGAGGCTTTAACTTCATCAATGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGCGTAATATTTATTCTCTTTGCATTGGGCCTCGAGTTTTCCATGGCAAAGCTTCGAGTTGTTCGATCTGTTGCTGTTCTTGGAGGCTTACTTCAAATTTTTCTATTTATGTGCATGTGTGGTTTTACTGTATCGTTATGTGGTGGTAAAGCTTCAGAAGGGATTTTTGTTGGTGCTTTCCTTTCTATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAATAATACTAATGCCCTTCATGGCCAAGTCACAATTGGGACCCTTATTTTACAGGATTGTGCTGTTGGATTGCTCTTTGCATTGCTTCCTGTTTTGGGTGGCACCTCAGGTGTTTTTCAAGGAGTGTTATCAATGACAAAACTGTTGGTGACATTGATTGCATTTCTCTCTATTCTGTCTATATTGTCTCGCACTTGCCTTCCGTGGTTGCTTAAACTGATGATAAGCCTATCATCACAGACAAATGAACTCTATCAGCTGGCATCTGTTGCGTTCTGCTTGCTTGTAGCCTGGTGTAGCGATAAGCTGGGATTAAGTCTAGAACTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATCTGGCTCAACATACACTAGAGCAAATTGAACCTATTTGCAATCTTTTCGCTGCTCTTTTCCTTTCCAGCATTGGAATGCTGATTCATGTTCATTTTCTTTGGAACCATGTTGATATTTTGGTAGCATCTGTTATTTTAGTGATTGTTATAAAAACAATCATAATTGCTTCAGTTGTGAAAGGATTTGGTTACAATAACAAGACTTCAGTACTTGTAGGAATGTCCATGGCACAAATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTTGAGGGTAAACTATATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACAACTCCTTTACTTTTCAAGCTGATCCCTGCTGTAGTGCATCTTGGTGTGCTATTGAGGTGGTTTTCTCCTGATAGTGCAGTAGAGATTGGATATAAGGTAGACAACCTCCTTCGCTCAGATAGCATTAAGCAACGGATAGTTTTGATGGACAAAGAAGCTCGCGATTGCTAA 1725 0.4232 MLVPVSLLIFISLLLLPHSSLAVRPIHSDPFDFQLANSTESNVSLSTPRQGSFADIIDRALQHEFTDTDQNEVPDAGGFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRGEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFINEMVQVETVAQFGVIFILFALGLEFSMAKLRVVRSVAVLGGLLQIFLFMCMCGFTVSLCGGKASEGIFVGAFLSMSSTAVVLKFLMEKNNTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSILSILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLAQHTLEQIEPICNLFAALFLSSIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSAVEIGYKVDNLLRSDSIKQRIVLMDKEARDC 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00479 574 Gene3D - 148 531 IPR038770 -
Trre2g00479 574 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 40 556 IPR045158 GO:0015386|GO:0071805|GO:1902600
Trre2g00479 574 Pfam Sodium/hydrogen exchanger family 155 524 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00479 Trre-Chr2 3915382 3922592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00479 48 572 Antiporters AT5G11800 80.038 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00479 K26735 - gmx:100811030 941.028