Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00469 ATGTGGGGTTACTCAACTAGGTTAATGTTATACGATGATCCTTGGAAGATTAAGAAAGTGTTGAAAGAGAGTGATGTTGATAGTTCGAGTAGATTGTTGCTCGATAAAAAATCAGTTGAGGTTTTGATGTTGACTGTGTTGGATAATAAGGGTGCTAATATTGATGAAGGAATTCCAGTGGAAATATGGGACATTAGCACTAACTCTACGCACTTTCTCACACTCAAGAGATGGAAATCGGGAAGTTATGTTTTAGTCGACGGATGGATTCCAAATTTTGTGACTAGAAAGGGTTTAAAGAAAGGAGATGAAATTGGTCTTCATTGGGATCAATACAACCAACGTTTTGATTTCTCTGTTCTTTAG 366 0.3689 MWGYSTRLMLYDDPWKIKKVLKESDVDSSSRLLLDKKSVEVLMLTVLDNKGANIDEGIPVEIWDISTNSTHFLTLKRWKSGSYVLVDGWIPNFVTRKGLKKGDEIGLHWDQYNQRFDFSVL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00469 121 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 6 121 - -
Trre2g00469 121 Gene3D - 14 119 IPR015300 -
Trre2g00469 121 SUPERFAMILY DNA-binding pseudobarrel domain 13 113 IPR015300 -
Trre2g00469 121 CDD B3_DNA 15 121 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00469 Trre-Chr2 3829831 3830196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00469 13 116 B3 DNA Binding Superfamily AT3G26790 32.432 6.73e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00469 - - cam:101493312 134.806