Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00461 ATGGGTATCTGCATATCCGTTGCATCTTCAGAGATTCATGGAATCCCTCAAGTTCATGATGAGAATATCATGATTTTTGAAGCAAGCAAGATTCAACATGAGACTCAGATACTTAGCTCTATTTACTCTAAACGAGGTACTAAAGGTCTCAACCAAGATGCTGCGTCTCTTTACAAGGGTTATGGGATTGAAGATGGAGCATTTTGTGGTGTTTATGATGGACATGGAAGGAATGGACATATAGTGAGCAAAATAGTAAACAATAGTTTACCTTCTCTCATATTAAGCCAAAAGAATGCTATTGAGGAGATTGATACAACAAAAAATGGTGTTGACAACAAACAAAACCAATTTTCAAAAAAATTTCTAAATATGAAAGAAGCTATTCTTGGTGCTTTCAAAGTGATGGATGAGGAGGTGAAGTTACAAGAGAATCTTGATTGTTCTTGTAGTGGAACTACTGCTGTAGTTGTCATAAGACAAGGTGAAGGACTTGTCATAGCTAATTTGGGTGACTCAAGAGCAATCTTAGGGACAATTCATGATGCAAAACTCAAAGCTATTCAATTGACTACAGATTTGAAGCCTGGATTGCCTTGTGAAGCAAAGAGAATAAGGAGTTGCAACGGTTGTGTATATGCGCTGAAGGAAGAACCACATGTCCAACGAGTATGGTTACCCAACGAGAACTACCCGGGTCTAGCCATGTCTAGAGCTTTTGGAGATTTCATACTCAAAGACCATGGTGTTATTGCTATTCCAGATATTTTCTATCACCCTTTAACATCAAGTGACCAATTTATTGTTCTTGCAAGTGATGGGGTGTGGGATGTACTAAGTAATGAGGAGGTTGCATCAATTGTGTGGATGATACAAAGTGAAGAGGAAGCTGCAAGGGCAGTGGTGGAAGCAGCCACAGCTGCTTGGGCAAAGAAGTACCCTTCCTCTAGGGTAGATGACTGTACAGTGGTTTGCCTTTTCCTGCAGAAGAAACCACAAAACTTGGGGTATATGGACAAGGGAAAATTAGGTTAA 1035 0.3971 MGICISVASSEIHGIPQVHDENIMIFEASKIQHETQILSSIYSKRGTKGLNQDAASLYKGYGIEDGAFCGVYDGHGRNGHIVSKIVNNSLPSLILSQKNAIEEIDTTKNGVDNKQNQFSKKFLNMKEAILGAFKVMDEEVKLQENLDCSCSGTTAVVVIRQGEGLVIANLGDSRAILGTIHDAKLKAIQLTTDLKPGLPCEAKRIRSCNGCVYALKEEPHVQRVWLPNENYPGLAMSRAFGDFILKDHGVIAIPDIFYHPLTSSDQFIVLASDGVWDVLSNEEVASIVWMIQSEEEAARAVVEAATAAWAKKYPSSRVDDCTVVCLFLQKKPQNLGYMDKGKLG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00461 344 ProSiteProfiles PPM-type phosphatase domain profile. 38 328 IPR001932 -
Trre2g00461 344 CDD PP2Cc 37 289 IPR001932 -
Trre2g00461 344 SMART PP2C_4 31 326 IPR001932 -
Trre2g00461 344 Gene3D - 19 331 IPR036457 -
Trre2g00461 344 Pfam Protein phosphatase 2C 65 307 IPR001932 -
Trre2g00461 344 PANTHER PROTEIN PHOSPHATASE 44 326 IPR015655 GO:0004722|GO:0006470
Trre2g00461 344 SUPERFAMILY PP2C-like 26 329 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00461 Trre-Chr2 3789516 3792677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00461 1 333 PP2C-type Phosphatase Gene Family AT5G26010 52.647 1.01e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00461 - - aip:107605550 461.455