Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00433 ATGTCCCTACCTTTTACAGATCGGAACCGTCGTCGCAACGCAAAACCACATCAAAATCCAGTTCCCGATGCAAAACGCGATGACGTAGAAGGTGGATTCGACGGTTCATCATTCACCGGCGCTGTATTCAACCTCTCAACAACAATTATGGGTGCCGGAATCATGGCTCTTCCTGCTGCCGTTAAACAACTCGGATTGATTCCTGGCTCAATCATGATTATTTTCTGTGCTATTTTAACTGAATCATCCATTGTTACTCTCTTGAAATTCACACGTGTGTCTAAAACGTCGACGTATTCTGGTGTTGTGAGGGATGCTTTTGGTGGCATTGGTCGATTTGTTTTGTTGCTTTGTATCATCTTCAACAATATGGGAATGCTTATTGCCTACATGGTCATTATCGGTGATGTGTTCTCGGGAACGTGGTCGGAAGGAGTCCACTATTCAGGAGTTCTAGAAGAATGGTTTGGTCAGCGTTGGTGGTCAACGCGTCCTATCTTGTTGCTGCTCACAACGCTTTTTGTTTTTGTGCCTCTCACATCCTTCAGACGTGTAGATTCACTGAGATACACATCAGCATTATCAGTGGGATTGGCTATTGTTTTTGTGGTGATAACAGCAGGTGTTGCAATTGTTAAGTTTGTCGATGGAAGCATTGGGGTGCCACACTTAATGCCCAAAGTCACTAGCCAAGAATCCTTTTGGAAACTCTTCACTACCGTCCCTATTTTAGTCACTGCTTACATCTGTCATCATAATGTGCATCCTATAGAGAATGAACTTAAAGATCCATCCCATATGAATGCAATAGTTCGGACATCACTTTTACTATGCGCATCTGTGTACATAGCGACAAGTCTTTTTGGAATTTTATTATTTGGAGACAAAATACAAGATGATGTACTTGCAAATTTTGATGGAGATCTTGGAGTTCCTTATGGTACATTTCTTAATGATGTAGTTAGAGTGAGTTATGGAATTCACCTAATCTTAGTGTTTCCAATTGTGTTTTTCTCCCTTAGACTCAATCTAGATGGTCTTTTGTTTCCACATGCCATTCCTCTTGCCTTTGACAACAAAAGATTTTGTTTTGTGACAATAATTCTCATGGCTTTTGTTTTTGTTGGAGCTAATTATGTTCCTAGTATTTGGTATGCCTTCCAATTCACAGGTGCTACAACTACCATTTCTGTTGGTTACATTTTTCCAGCTGCCATTGCTCTTAAGGACAATCGTGGGGTTGCAACAAAAAAAGACAAGTTGTTATCTTTGTTGGTTATACTTTTGGCTGTTTCATGTAGCACTATAGCCATCTTTAGTGACTTGTATTATAGCACTTTCAGTAATGAAACAACATCACATGAAGCTTAA 1371 0.4012 MSLPFTDRNRRRNAKPHQNPVPDAKRDDVEGGFDGSSFTGAVFNLSTTIMGAGIMALPAAVKQLGLIPGSIMIIFCAILTESSIVTLLKFTRVSKTSTYSGVVRDAFGGIGRFVLLLCIIFNNMGMLIAYMVIIGDVFSGTWSEGVHYSGVLEEWFGQRWWSTRPILLLLTTLFVFVPLTSFRRVDSLRYTSALSVGLAIVFVVITAGVAIVKFVDGSIGVPHLMPKVTSQESFWKLFTTVPILVTAYICHHNVHPIENELKDPSHMNAIVRTSLLLCASVYIATSLFGILLFGDKIQDDVLANFDGDLGVPYGTFLNDVVRVSYGIHLILVFPIVFFSLRLNLDGLLFPHAIPLAFDNKRFCFVTIILMAFVFVGANYVPSIWYAFQFTGATTTISVGYIFPAAIALKDNRGVATKKDKLLSLLVILLAVSCSTIAIFSDLYYSTFSNETTSHEA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00433 456 MobiDBLite consensus disorder prediction 8 28 - -
Trre2g00433 456 MobiDBLite consensus disorder prediction 1 28 - -
Trre2g00433 456 PANTHER AMINO ACID TRANSPORTER 31 435 - -
Trre2g00433 456 Pfam Transmembrane amino acid transporter protein 35 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00433 Trre-Chr2 3512184 3516317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00433 11 443 Amino Acid or Auxin Permease AAAP Family AT3G30390 54.897 2.82e-175 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00433 K14207 - gmx:100814034 677.167