Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00356 ATGATGAATAGCATCTTTGCAAAACTATTGTTCACAACTTTGTGCATGATCTTTGTGCTCAAAGCAGAATCTTTAGTATTTGCAGACCAAAGATTAAGTATAGTGTATCCAGTGATTCAAAAATTCAAGTCTTTGATTACTTCAGATCCATTAGGTGTTACAAAAACATGGATAGGTTCTGATATATGCAACTATAAAGGATTCTACTGTGATCATCCACCAGATAACAATTCTGCTATTGCTTTAGCCTCGATCGATTTCAATGGTTTTCATCTAAGTGCTTCTACCCTTAATGGTTTTATTGATAAACTACCTGATATTGCACTTTTTCATGCAAATTCCAACAATTTTGTTGGCACGATCACTTCTCAAATCACTAAACTTCCATATCTTTATGAGCTTGATTTAAGCAATAATCAATTTTCAGGTGCTTTTCCAATTGCTGTTCTTGGTATGAAAAGTTTAACATTTTTGGATATAAGGTTCAACTTTTTCTCTGGTGGTGTTCCACAACAAATATTCACACAAAACCTTGAAGTTCTTTTCATCAATAACAATCTCTTGACACAAACTTTGCCTGAAAATTTAGGCACAAGCTCAACTACTCATATTTTTTTACTCACTTTAGCTAACAATAAATTTATGGGACCAATACCGAGAAATCTTCCGATAGCTTTATCGAGTTTATCCGAGGTTGTTTTACTAAACAATGAGTTAACAGGTTGTTTACCTCATGAAATTGGTTATTTTCAAGAAGCTATAGTATTTGATGTTGGAAATAATCAACTAACTGGTCCTATACCATTTTCTCTTAGTTGTCTTGAGAAAGTTGAGGTTGTTAATTTGGCTAGTAACATGTTTTATGGAATGGTTCCTGAAGTTGTTTGTGCTGAGTTGGTGAATTTGGTGAATTTTTCTTTGTCAGATAACTATTTTACTCATGTGGGACCATTTTGTAGGATGTTGATACAAAGAGGTGTTCTTGATGTTGGAAAAAATTGTATTCATGATCTTCCTTTTCAAAGATCAATGGAAGAGTGTGCTCATTTCTATGCACAACCAAGGATGTGTCCTTTTATGTGGTTTCATAGTTTTATTCTTCCTTGTAAGTTTCCATTTCAAAAATCTTCTGTTGCTTCTATTCCTTAA 1149 0.3316 MMNSIFAKLLFTTLCMIFVLKAESLVFADQRLSIVYPVIQKFKSLITSDPLGVTKTWIGSDICNYKGFYCDHPPDNNSAIALASIDFNGFHLSASTLNGFIDKLPDIALFHANSNNFVGTITSQITKLPYLYELDLSNNQFSGAFPIAVLGMKSLTFLDIRFNFFSGGVPQQIFTQNLEVLFINNNLLTQTLPENLGTSSTTHIFLLTLANNKFMGPIPRNLPIALSSLSEVVLLNNELTGCLPHEIGYFQEAIVFDVGNNQLTGPIPFSLSCLEKVEVVNLASNMFYGMVPEVVCAELVNLVNFSLSDNYFTHVGPFCRMLIQRGVLDVGKNCIHDLPFQRSMEECAHFYAQPRMCPFMWFHSFILPCKFPFQKSSVASIP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00356 382 Gene3D Ribonuclease Inhibitor 37 201 IPR032675 -
Trre2g00356 382 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 23 360 - -
Trre2g00356 382 Gene3D Ribonuclease Inhibitor 202 350 IPR032675 -
Trre2g00356 382 SUPERFAMILY L domain-like 38 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00356 Trre-Chr2 2810950 2812098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00356 24 354 Leucine-rich Repeat extension Gene Families AT3G24480 42.296 7.73e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00356 - - tpra:123897584 743.421