Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00348 ATGTATTCTCTGTGCCTCCAAAATGCAACTGTCCACTTTCCCTCCAACCTATCTTCTTCTCTTCTTTTCCCAATCAATAATCACAAATTATCCACAAAAGCCCGTTTCCAATGCTCCATCAAAACCAACAACACAAACACCAAACAAGTCACTAACCAGAAGGTTCTAATCCTATGGGACCTCGACAACAAACCTCCACGTGGACCTCCATACAACGCCGCACTCTCTCTCAAAACCCTAGCCGAACGCTTTGGCGACGTCGTTTCAATCTCCGCATACACAATACGACACTCCTTCTTCAATCACACTCAATGGCAACCCGACCAAAACCCTAACCCTAATTCCAAAATCTGCCGTGTATGCGGCCACCAATGCAAATCGATTTTCGATCTCAAAATTCACTTCAAGCAAATTCATGAGTATCAGTATCAGAAGTGGCTGAAACGATTGAAATCAATTAAATTGGATCGCTCGAAGGTTCGGTTTATTCGTAGGAGGCATATTCATAATGAGGCTGCGAGGACTACTGCTGCGCCTAGAGTTGGATTTGGTTTAGCTTCGGAGTTGCGGCGTGCTGGTGTTTTTGTGAAGATTGTGGAACTTGGTGATAAGGTGAATGCTGCTGATTCTTCGTTGAAGAGGGAGATGATGAGTGGAGGGGTTGATTGGTTGATTTTGGTTTCCGATGATTCGGAGTATTCGGAGATGTTGAGGGAGGTGAGGGAGATGAAATTGGGGACTGTTGTTGTTGTTGGAGATTATTGGGATAGGGATTTGGGGAGGAATGCTGATTTGTGGCTTCCTTGGATTGTTGTTGAGAATGGAAAGGTTGAGGAAATGGATTTAATGAGAAGAAGAACATTAGCAGAGGTTTTGGATGATGAATTGAAAGAAGATGAGAATGTGGATGATGAGTATACATTAGGAGAAGAACAAGAAGATGATGGGTTTTATGTTTATTAA 963 0.4299 MYSLCLQNATVHFPSNLSSSLLFPINNHKLSTKARFQCSIKTNNTNTKQVTNQKVLILWDLDNKPPRGPPYNAALSLKTLAERFGDVVSISAYTIRHSFFNHTQWQPDQNPNPNSKICRVCGHQCKSIFDLKIHFKQIHEYQYQKWLKRLKSIKLDRSKVRFIRRRHIHNEAARTTAAPRVGFGLASELRRAGVFVKIVELGDKVNAADSSLKREMMSGGVDWLILVSDDSEYSEMLREVREMKLGTVVVVGDYWDRDLGRNADLWLPWIVVENGKVEEMDLMRRRTLAEVLDDELKEDENVDDEYTLGEEQEDDGFYVY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00348 320 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 35 306 - -
Trre2g00348 320 ProSitePatterns Zinc finger C2H2 type domain signature. 118 139 IPR013087 -
Trre2g00348 320 MobiDBLite consensus disorder prediction 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00348 Trre-Chr2 2746102 2747064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00348 53 283 C2H2 Transcription Factor Family AT5G52010 48.016 2.34e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00348 - - psat:127102720 407.912