Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00253 ATGAAAACTTCTGATAAAGGATTAACTAAAGCATTTTACAATGATAATATATGTTCAATATCAACTTCTGATTCAGCTAGTAGTGAAAGTGAGTTAAGTCATGAAAATCCCTTTATCTATCATCATCAACATCATCATCATGAGCCAACATTGAGATTAGGATTTGGAAACTCAGATTTGATGAATCCACATCATCATAATCATCATCTTCATCGTCATCAAGTACAAGGTGTATCAAGAAACTTCAACCATCAACACTTCCAACCTCACATCTATTGTCGCGACTTCAAGCGAAATACAAGAGATGTTAATGGTGTCAAAAGAAGTGTTAGAGCTCCAAGAATGAGATGGACCACAACTCTTCACTCTCATTTTGTTCATGCCGTTCAACTTCTCGGTGGTCACGAAAGAGCAACACCAAAATCTGTGTTAGAACTAATGAATGTGAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGACCACTGACAAATCAGGAGCAGGTCATGGAATGCTACAGACACAAGGAATTAATAATATTGTTCCTTTGCATGGAACTAATTCTTGTGAGAGACCAAATTTACCACAAGACAGGACATCTTGGCAACCATCAAAAGAGACAAATACAAACAATACTGAAGAAAAATCCGAAAATGGTTTGGTGTATTCTCATTTCAAGGAAAATGATACCATGGTGAAGAGGTTGGACTCTACCCAATTGTCACATTCCAACTCCATGATTGACTTAGAATTCACACTTGGAAGGCCTAATTGGGAAAAAGACCAAGCTGAATCATCAAGAGAATTAGCTCTTCTCAAGTGTTAA 849 0.3722 MKTSDKGLTKAFYNDNICSISTSDSASSESELSHENPFIYHHQHHHHEPTLRLGFGNSDLMNPHHHNHHLHRHQVQGVSRNFNHQHFQPHIYCRDFKRNTRDVNGVKRSVRAPRMRWTTTLHSHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKTTDKSGAGHGMLQTQGINNIVPLHGTNSCERPNLPQDRTSWQPSKETNTNNTEEKSENGLVYSHFKENDTMVKRLDSTQLSHSNSMIDLEFTLGRPNWEKDQAESSRELALLKC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00253 282 Pfam Myb-like DNA-binding domain 114 165 IPR001005 -
Trre2g00253 282 Gene3D - 112 169 - -
Trre2g00253 282 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 24 270 IPR044847 GO:0000976|GO:0006355|GO:0010158
Trre2g00253 282 FunFam Myb family transcription factor 111 169 - -
Trre2g00253 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 113 166 IPR006447 GO:0003677
Trre2g00253 282 SUPERFAMILY Homeodomain-like 110 166 IPR009057 -
Trre2g00253 282 MobiDBLite consensus disorder prediction 195 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00253 Trre-Chr2 2101482 2105209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00253 78 188 G2-like Transcription Factor Family AT5G42630 68.376 2.32e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre2g00253 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00253 - - gmx:100778242 302.367