Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00248 | ATGACTATTATTCCTTCCTTACTCTGTTCTCTCCAAGTTCTCCTAATCATAATATTCACATCTCAAACCAAAGCTGTAGTATACGATGAAATAAACTTATACCACTACATTTGTGATCATAGTAACAATAGAGGCAACTACACAACCAATAGCACCTATCACAAAAATCTCAACACACTTTTATCCACCCTCACTTCCAACACACAAATCAACTATGGTTTCTACAATTTTTCACACGGGGAAAACCTCGACAAAGTCTACGCAATTGGACTCTGTCGAGGTGATCTTTTGCCGAACAATTGTCGCAGTTGCCTCGGAAGTGCTAGAGCAAATCTCACACGTACTTGTCAAAATAGAAAAGAAGCAATTTTTTGGTCTCAAGACGAAAAATGCATGTTGCGTTATTCGGACCGATTAATATTAGGCATCATGGAAGATGTTCCTATGTTTGTTTCGAATAACGATGATGATTCGGTTGATGTTGATTTGTCCAATGAAGTTGTTAATAATTTGTTGGGAAATTTAACAAGTAGAGCTGTGAAAGGTGATTCTAGGATTAAATATGCTGCATCAAGTTTACCTGGTCCTAAGTATGAGGTTATATATGGTTTAGTTCAGTGTACACCTGATTTGTCAGAGACTGATTGCAATTCATGTTTGGTTAAGAGTCTTCAACAAATTCCAAGTTGTTGTAAAAATAAGATTGGTGGAAGAGTTGTTAGGCCTAGTTGTAATATGAGATTTGAGACCTCTTTTCTTTTCTATGAACCTAGAGCGTCACCGCCGCCGCCACCACCATCTCCTCCTCCACCCGCCACCACCGGTAGCAACACTACCTCACAAGGGAAAAGCAAGAACAATAATTTAAGACTAAGGAGGCCAAAGAAAAGGTTTGAAGAAATTCAAGAAGAAGAAGAAGACGGAGAAGACAAAATTGAAATTTCCGAACCCTTGCAGTTCAACTTCAACACCATATGTAGCGCTACAAATGACTTCTCTAATTCTAATAAACTTGGAGAAGGCGGATTCGGGATTGTTTACAAAGGTAGGCTTTCCAATGGAGAAGAGATTGCTGTCAAAAGGTTGTCGGTGAATTCTGGACAAGGAGATTCAGAGTTTAAGAATGAGGTGGTTTTAGTGGCAAAGCTTCAACACCGAAATTTAGTTAGACTACTCGGTTTCTGTCTAGAAGGAAGAGAAAGAGTACTTGTATATGAGTTTGTTCATAATAAAAGTCTTGATTATTTTATTTTTGATCAAGCTAAGAGAGCACAATTAAATTGGGAATTGCGCTACAAAATCATTTTAGGTATTGCTCGAGGCATTTTGTACCTTCACGAGGATTCTCGACTACGCATTATTCATCGTGATCTCAAAGCAAGTAACATTCTTTTAGACGAAGAGATGAATCCTAAGATAGCCGATTTTGGCATGGCAAGACTATTTGTTGTGGACCAAACTCAGGAAAAGACAAATAGAATTGTGGGAACCTATGGATATATGGCACCTGAGTACGCAATGCATGGACAATTTTCAGTGAAGTCAGATGTCTTCAGTTTTGGTATATTGGTTCTTGAAATTGTAAGTGGTACAAAAAATAGCGGCATTCGTGATACAGAGTATCTCTCGAGCTTTGCATGGAGAAATTGGAAGGAAGGTACTGCAACAAATATCATAGATCCCACATTAAACAATGATTCAAGAAATGAAATATTGAGATGTATCCATATTGGATTACTCTGTGTTCAAGAGAATGTAACTAGTAGACCAACCATGGCTTCTGTTGTAGTGATGCTTAATAGTCATTCTGTCACTCTTCCAATGCCTTTGGAGCCTGCATTTCATATGGATAGTGGAGATATGAAATCATGGGGTCATAGTTCAGCTCAAGAATCAGTCAATCATGCTTCAAATACAGAGTTATATCCTCGCTAG | 1935 | 0.3819 | MTIIPSLLCSLQVLLIIIFTSQTKAVVYDEINLYHYICDHSNNRGNYTTNSTYHKNLNTLLSTLTSNTQINYGFYNFSHGENLDKVYAIGLCRGDLLPNNCRSCLGSARANLTRTCQNRKEAIFWSQDEKCMLRYSDRLILGIMEDVPMFVSNNDDDSVDVDLSNEVVNNLLGNLTSRAVKGDSRIKYAASSLPGPKYEVIYGLVQCTPDLSETDCNSCLVKSLQQIPSCCKNKIGGRVVRPSCNMRFETSFLFYEPRASPPPPPPSPPPPATTGSNTTSQGKSKNNNLRLRRPKKRFEEIQEEEEDGEDKIEISEPLQFNFNTICSATNDFSNSNKLGEGGFGIVYKGRLSNGEEIAVKRLSVNSGQGDSEFKNEVVLVAKLQHRNLVRLLGFCLEGRERVLVYEFVHNKSLDYFIFDQAKRAQLNWELRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFVVDQTQEKTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIVSGTKNSGIRDTEYLSSFAWRNWKEGTATNIIDPTLNNDSRNEILRCIHIGLLCVQENVTSRPTMASVVVMLNSHSVTLPMPLEPAFHMDSGDMKSWGHSSAQESVNHASNTELYPR | 644 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00248 | 644 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 453 | 465 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00248 | 644 | MobiDBLite | consensus disorder prediction | 623 | 644 | - | - | |
Trre2g00248 | 644 | ProSiteProfiles | Gnk2-homologous domain profile. | 35 | 140 | IPR002902 | - | |
Trre2g00248 | 644 | ProSitePatterns | Protein kinases ATP-binding region signature. | 338 | 360 | IPR017441 | GO:0005524 | |
Trre2g00248 | 644 | SMART | serkin_6 | 332 | 605 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00248 | 644 | MobiDBLite | consensus disorder prediction | 621 | 644 | - | - | |
Trre2g00248 | 644 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 606 | - | - | |
Trre2g00248 | 644 | Gene3D | Phosphorylase Kinase; domain 1 | 294 | 407 | - | - | |
Trre2g00248 | 644 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 148 | 252 | - | - | |
Trre2g00248 | 644 | CDD | STKc_IRAK | 338 | 600 | - | - | |
Trre2g00248 | 644 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 408 | 607 | - | - | |
Trre2g00248 | 644 | ProSiteProfiles | Gnk2-homologous domain profile. | 146 | 253 | IPR002902 | - | |
Trre2g00248 | 644 | Pfam | Protein tyrosine and serine/threonine kinase | 335 | 598 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g00248 | 644 | Gene3D | - | 34 | 139 | IPR038408 | - | |
Trre2g00248 | 644 | Gene3D | - | 150 | 252 | IPR038408 | - | |
Trre2g00248 | 644 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 293 | 407 | - | - | |
Trre2g00248 | 644 | Pfam | Salt stress response/antifungal | 166 | 250 | IPR002902 | - | |
Trre2g00248 | 644 | Pfam | Salt stress response/antifungal | 38 | 137 | IPR002902 | - | |
Trre2g00248 | 644 | MobiDBLite | consensus disorder prediction | 257 | 273 | - | - | |
Trre2g00248 | 644 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 32 | 140 | - | - | |
Trre2g00248 | 644 | SUPERFAMILY | Protein kinase-like (PK-like) | 314 | 599 | IPR011009 | - | |
Trre2g00248 | 644 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 40 | 637 | - | - | |
Trre2g00248 | 644 | MobiDBLite | consensus disorder prediction | 255 | 313 | - | - | |
Trre2g00248 | 644 | ProSiteProfiles | Protein kinase domain profile. | 332 | 605 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00248 | Trre-Chr2 | 2064222 | 2067834 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00248 | 13 | 644 | Receptor kinase-like Gene Family | AT4G21410 | 48.892 | 0.0 | 591 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Trre2g00248 | PK_Tyr_Ser-Thr | 2.1e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00248 | - | - | gmx:113000774 | 755.747 |