Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00246 ATGTCTGGTTTGTTACCTTCCTTTAAGCTCCATCCCTTAATTTATTATCATTATCTCCTTCTCCTAATCATTTTATCATCATCACAATTAGCCAATGCTGCAAACAATACACAAAACTTTCACTACTTCTGTAATTCTAACAATAGAGGTAACTATACAGTTAAAAGCACATACCACAAAAACCTTAAAACACTTTTGTCTAATCTCACTTCCAACACAAAAATCAACAACTACGGTTTCTATAATTTCTCAAACAACCAAAACATAAACAGAGACAGAGTAAATGCAATCGGTCTTTGCAGAGGCGACGTTAGGCCAAACGAGTGTCTTAGTTGTCTTGAAAGTTCAAGAAATAATCTCACACAGCTTTGTCCATACCAAAAAGAAGCTATTGGTTGGTACGAAGACGAAAAATGCATGTTGCGTTATTCAGACCGTTTGATATTTGCCTCGGTAATGGAAACAAGACCTGTTTATTATGCAAATAACATGGGAGATGCAACTGATTTGAATGAGTTCAATTCAGTGGTTAGGAACTTGTTGTATAACTTGACAAGTAGAGCTTCATCGGGTGATTCTCGTTTAAAATATGCCGTGGGGAGTGCGAGTGGTCCTAATGATCAAACTATATATGGTCTTGTGCAGTGTACTCCTGATTTGTTTGAGTCTCAATGCAGTGATTGTTTGGTTCAATCTATCGCGCGTATAGCAATTGATTGTTGTAAAGATAAGAAAGGTGGAAGAGTTGTTAGGCCTAGTTGTAGCATGAGATTTGAAACCAATTTCCTCTTCTATGAATCAACAGCACCATCCCCTCCTCCTCCATCCACCACCAATAACACTTCCTCTCAAGGAAAGAGCAACACTACCACTGTTATCGCCATAGCAGCACCGGTTGTTGCTGTTATGGTTCTCATCATTATCTGCATCTATTTAAGAATAAGGAAGTCGAGGAAAAAGTTTAAAACACAAGAAGAAAATGAAGATGATGAAATTGAAATTTCTGAGTCATTGCGATTCAACTTTGACACAATAAGAGATGCAACGAATGACTTTGTTGAATCTAATAAACTTGGACAAGGTGGATTTGGGATTGTATACAAAGGTAGGCTCTCCACTGGACAAGAGATTGCTGTCAAAAGGTTGTCAAAGGATTCAGGTCAAGGAGATCTAGAATTTAAGAATGAAGTGCTTTTAGTGGCTAAGCTTCAACACCGAAATTTAGTTCGGCTACTCGGTTTCTGTATAGAAAGAAGAGAAAGACTGCTTGTCTATGAATTTGTTCCGAATAAGAGCCTTGATTACTTCATTTTTGATCAAACCAAGAGAGCACACTTAAGTTGGGAAATAAGGTATAAAATCATTGCAGGTACTGCTCGAGGAATTCTTTACCTTCATGAGGATTCTCGGTTACTCATTATCCATCGTGATCTCAAAGCAAGCAACATTCTTTTAGATGAAGAGATGAATCCAAAGATAGCAGATTTTGGCATGGCTAGATTGTTTGGTGTGGGCCAAACTGAGGAAAATACAAATAGAATTGTGGGAACCTACGGATATATGGCACCCGAGTATGCAATGCATGGACAGTTTTCAGTGAAGTCAGATGTGTTTAGTTTTGGTGTATTGATTCTTGAGATTATAAGTGGCTACAAAAATAGTTGCATTGGGGAAAGTATGGAGTATCTACTAAGCTTTGTATGGAGAAATTGGAGGGATGAGTCCCTAACAAATGTTATAGACCCCACATTAAACAATGACTCAGTGAATGAAATAGTGAGATGCATCCATATTGGGTTACTATGTGTTCAAGAAAATGCAGCTATCAGGCCAAGTATGGCTTCTGTTGTACTAATGCTTAATAGTCATTCTCTCGCTCTCTCTCGACCTTTAGAACCTGCATTTTATGTAGACAGTGGAGCTGGAGACCTTCAAAATCACATGATGCAGTCTTGGGAATATAGTTTAATTCAAGAATCGATAAATGAGGCTTCGATTACAGAGCCATATCCTCGCTAG 2019 0.3809 MSGLLPSFKLHPLIYYHYLLLLIILSSSQLANAANNTQNFHYFCNSNNRGNYTVKSTYHKNLKTLLSNLTSNTKINNYGFYNFSNNQNINRDRVNAIGLCRGDVRPNECLSCLESSRNNLTQLCPYQKEAIGWYEDEKCMLRYSDRLIFASVMETRPVYYANNMGDATDLNEFNSVVRNLLYNLTSRASSGDSRLKYAVGSASGPNDQTIYGLVQCTPDLFESQCSDCLVQSIARIAIDCCKDKKGGRVVRPSCSMRFETNFLFYESTAPSPPPPSTTNNTSSQGKSNTTTVIAIAAPVVAVMVLIIICIYLRIRKSRKKFKTQEENEDDEIEISESLRFNFDTIRDATNDFVESNKLGQGGFGIVYKGRLSTGQEIAVKRLSKDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFCIERRERLLVYEFVPNKSLDYFIFDQTKRAHLSWEIRYKIIAGTARGILYLHEDSRLLIIHRDLKASNILLDEEMNPKIADFGMARLFGVGQTEENTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIISGYKNSCIGESMEYLLSFVWRNWRDESLTNVIDPTLNNDSVNEIVRCIHIGLLCVQENAAIRPSMASVVLMLNSHSLALSRPLEPAFYVDSGAGDLQNHMMQSWEYSLIQESINEASITEPYPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00246 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Trre2g00246 672 Gene3D - 36 147 IPR038408 -
Trre2g00246 672 Gene3D - 155 262 IPR038408 -
Trre2g00246 672 CDD STKc_IRAK 358 621 - -
Trre2g00246 672 Gene3D Transferase(Phosphotransferase) domain 1 428 629 - -
Trre2g00246 672 ProSiteProfiles Gnk2-homologous domain profile. 155 263 IPR002902 -
Trre2g00246 672 MobiDBLite consensus disorder prediction 267 286 - -
Trre2g00246 672 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Trre2g00246 672 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Trre2g00246 672 SMART serkin_6 352 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00246 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 37 148 - -
Trre2g00246 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 668 - -
Trre2g00246 672 ProSiteProfiles Gnk2-homologous domain profile. 40 148 IPR002902 -
Trre2g00246 672 SUPERFAMILY Protein kinase-like (PK-like) 333 620 IPR011009 -
Trre2g00246 672 Pfam Salt stress response/antifungal 167 260 IPR002902 -
Trre2g00246 672 Pfam Salt stress response/antifungal 44 145 IPR002902 -
Trre2g00246 672 Pfam Protein kinase domain 353 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00246 672 FunFam Cysteine-rich receptor-like protein kinase 10 315 427 - -
Trre2g00246 672 ProSiteProfiles Protein kinase domain profile. 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00246 672 FunFam cysteine-rich receptor-like protein kinase 10 428 627 - -
Trre2g00246 672 FunFam Cysteine-rich receptor-like protein kinase 10 157 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00246 Trre-Chr2 2049200 2052336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00246 45 672 Receptor kinase-like Gene Family AT4G21410 50.685 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre2g00246 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00246 - - gmx:113000774 808.905