Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00245 ATGGCTTCTTCCTCTACTCTCTCAATTCCCTCTCCCAACCGCAATTTCATCAAACACCAATCTAAACTCTCCACGTCATCAAACCGTTTCAAATCTTCCACCACCTTCCTCCCTTCAATCAAATCCTCCTCCGTTTCAAATCCACCACCTTCTCTTTCAACCTCACCGCACACCACCACCAAACTTCCGATCCGGAAAATCCCCGGCGATTACGGCATCCCTTTCATCACTCCTTACAAAGAACGTCTCGACTATTTCTACAACCAAGGTCGTGATGAATATTTCAAATCCAGAATCCAAAAATATCAATCCACAATTTTCCGAACAAATGTTCCTCCCGGTGGTTTCATAGCTAAGAATCCAAACGTCGTCGTTTTACTCGACGCTAAAAGTTTCCCTATCCTCTTTGATACTAACAAAATCGATAAAACTGATGTCTTCACCGGAACTTATACTCCGTCTACTGAACTCACCGGAGGTTATAGAGTCCTCTCTTATCTTGATCCATCTGATCCTAAACATACTCAGCTCAAAAACCTCATGTTTTTTCTACTTAAATCTCGCCGGAACCACGTGATTCCGGAGTTTCGATCGTCTTATAAAGAGTTTTTTGCTACGGTGGAGAATGAGCTTGCTAAAACTGGAAAAGCGAGTTTCGCGGACGCTAATGATCAGGCTGCTTTTAATTTCTTGAGTCGTTCTTTGTACGGTGTTAACCCTGTTGACACTGAACTTGGGCTTGACGGCCCAAAAATGGTTCAGAAATGGGTTTTGTTTCAGTTAGGTCCAGTTTTGAAACTGGGCCTACCGAAATTTTTAGAAGATTCTATGATCCATAATTTTCGTCTTCCATTTAAGCTTATTAAGAAAGATTATCAGAGATTGTATGATTTCTTTTATAATTCTTCGGGATTTGCGCTTGATGAAGCGGAGCGTTTGGGTGTTTCGAGGGAGGAGGCTTGTCATAATTTATTGTTTGCGACGTGTTTTAATTCGTTTGGTGGATTTAAGTTATTTTTCCCGAATGTGATGAAATGGATTGGACGCGGTGGTGTGAGGTTGCATACTAAACTTGCTACGGAGATTAGAGAGGCAGTTAGGGCTGCGGGCGGGGAGGTTACTATGGGAGCAATGGAGAATATGCCGTTGATGAAATCAGTGGTTTATGAAGCTTTTCGTATTGATCCACCGGTTCCATTACAATTTGGACGAGCGAAAAGGGATATGGTAATTGAGAATCATGAGAATGGTTTTTTGGTGAAGAAAGGGGAAATGCTGTTAGGGTATCAACCATTTGCGACTAAGGATCCTAAGGTTTTCGATAGAGCTGAGGAATTTGTCGCGGATAGGTTTGTTGGTGATGAAGGCGAGAAATTGTTGAAACATGTGGTTTGGTCTAATGGACCTGAAACTGAATCTCCAAGTGTTAGGAATAAACAATGTGCTGGTAAAGATTTCAGCACCTTGGTTTCTAGGCTTTTGGTTGTTGAACTTTTTCTTAGGTATGATTCCTTTGAAATTCAAGTTGGAAATTCTGCTTTGGGTACTGCTATTACCCTCACCTCTCTAAAGAGAGCAAGTTTTTAA 1587 0.4152 MASSSTLSIPSPNRNFIKHQSKLSTSSNRFKSSTTFLPSIKSSSVSNPPPSLSTSPHTTTKLPIRKIPGDYGIPFITPYKERLDYFYNQGRDEYFKSRIQKYQSTIFRTNVPPGGFIAKNPNVVVLLDAKSFPILFDTNKIDKTDVFTGTYTPSTELTGGYRVLSYLDPSDPKHTQLKNLMFFLLKSRRNHVIPEFRSSYKEFFATVENELAKTGKASFADANDQAAFNFLSRSLYGVNPVDTELGLDGPKMVQKWVLFQLGPVLKLGLPKFLEDSMIHNFRLPFKLIKKDYQRLYDFFYNSSGFALDEAERLGVSREEACHNLLFATCFNSFGGFKLFFPNVMKWIGRGGVRLHTKLATEIREAVRAAGGEVTMGAMENMPLMKSVVYEAFRIDPPVPLQFGRAKRDMVIENHENGFLVKKGEMLLGYQPFATKDPKVFDRAEEFVADRFVGDEGEKLLKHVVWSNGPETESPSVRNKQCAGKDFSTLVSRLLVVELFLRYDSFEIQVGNSALGTAITLTSLKRASF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00245 528 CDD CYP74 96 521 - -
Trre2g00245 528 MobiDBLite consensus disorder prediction 1 63 - -
Trre2g00245 528 Gene3D Cytochrome P450 62 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00245 528 PANTHER CYTOCHROME P450 26 62 502 - -
Trre2g00245 528 MobiDBLite consensus disorder prediction 1 61 - -
Trre2g00245 528 PRINTS E-class P450 group IV signature 481 499 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00245 528 PRINTS E-class P450 group IV signature 418 432 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00245 528 PRINTS E-class P450 group IV signature 434 452 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00245 528 PRINTS E-class P450 group IV signature 381 397 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00245 528 FunFam Allene oxide synthase, chloroplastic 62 528 - -
Trre2g00245 528 Pfam Cytochrome P450 356 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00245 528 SUPERFAMILY Cytochrome P450 61 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00245 Trre-Chr2 2042450 2044036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00245 50 528 Cytochrome P450 AT5G42650 61.875 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00245 K01723 - gmx:100037481 768.459