Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00223 ATGGATTCTAACAGAGAAACTTCAGCAATGAAGATTCAGAGGAAGTCGTCGTTGAGGGAGAAAGAGAACAATAGAATAAGAGAAAGAAGAAGGAGAGCCATAACAGCAAGGATATTCAATGGACTTCGAACTCAAGGGAACTACAATTTGTCGAAGCATTGTGACAACAACGAGGTCCTCAAAGCTCTATGTGAAGAAGCTGGTTGGTTCGTTGAAGAAGACGGAACCATCCATCGCAAGGGTTGCAAGTCTCCAGTAAACAACCATGCAGGCACCTCCACCATAACCACCCCTTTCTCTTATTACCAAAATCCAAGTTCTGTTTTTTCATCCTATCCAGCTCCAATGCCTTCATACCAATTCACTCCTCAGTCTTACAATCCTCCACTGTGGATGCCAAACAGTACTCCTGTAATACCTCCTCTCCATTCACCAACAACAACAAAAACCAAACCAATTCCTACATGGGATTCTATTTCCAAAGAATCTATGGCTTTTTTCAATTACCCTTTTGTTGCATCTTCTACCGCTGCTAGCCCCATTTCTAATCAGGGGATTAAGTTCCAACCTTTTGCTCAATCTCCATTTGCAGTGCCAAATTCTTCATCTTTCAATGCTGTAGCTAATAACTCAATTGGAGAGATGGGAAGTTCAATAATGTTTGGGGTGCAAGCAAAGCCTTGGGTTGGGGAGAAAGTTCATGATGAAGGAGTGGATGATTTGGTGAAACTCACCCTTGGAACTGGAAAATCAAGGAGTTAG 762 0.4226 MDSNRETSAMKIQRKSSLREKENNRIRERRRRAITARIFNGLRTQGNYNLSKHCDNNEVLKALCEEAGWFVEEDGTIHRKGCKSPVNNHAGTSTITTPFSYYQNPSSVFSSYPAPMPSYQFTPQSYNPPLWMPNSTPVIPPLHSPTTTKTKPIPTWDSISKESMAFFNYPFVASSTAASPISNQGIKFQPFAQSPFAVPNSSSFNAVANNSIGEMGSSIMFGVQAKPWVGEKVHDEGVDDLVKLTLGTGKSRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00223 253 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 10 212 IPR033264 GO:0003700|GO:0006351|GO:0009742
Trre2g00223 253 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
Trre2g00223 253 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00223 Trre-Chr2 1843554 1844763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00223 33 252 BZR Transcription Factor Family AT1G75080 42.568 8.89e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Trre2g00223 BES1_N 1.3e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00223 K14503 - gmx:100785743 242.662