Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00213 ATGGCTCATCTTCTACTCTTGTTGATTTTTATCCTGCTGCTAGTGTTCATAGCAAGGATCACCTACTCAATCATTTGGCTTCCATGGATCATTACTCGTCACTTTCACAAACAAAACATAAGGGGTCCTCCCTACCGTCTGATTAAAGGAAACGTCGATGAGATCAACCGTATGTTTGCGGAAGTTCAATCTAAGCCAATGGAGTTATGCCACGATATTGTTCAGCATGTGTTTCCATACTATCATAGGTGGGCTTCTGTGTACGGGAAAACTGTCCTCAGTTGGTACGGGTCGAGGCCCAGACTGATATTATCCGACCCAATTATTATTAAGGAGGCACTTTTGAAAACGGGTGAATGGTTTGAGAAGATGGATCCGAATCCGTTGTCAAAACAGTTTTATGGAGAAGGAATTCTATTCTCAAAGGGAAAGAAGTGGACCACTTATAGATCAATTGCTAATCATGCTTTTAAAATGGAGAGGATTAAGTCTTGGATCCCCCAAATTATAGACACAACAAAATTAATGTTTTACAAGTGGGAAGATGAGAACAATGTCAATGAAGAATTTGAGATTGATGTGAATAAAGATCTCCATAATCTTTCAGCTGATATTATATCTAGAGTTGCTTTTGGAAGTAGCTATGAAGAAGGGAAAGAGATTTTTGATTTACAAGATCAACATTGTCATCTTGCTAGTCTTGCTCAAAGAAGTGCTTATTTTCCTGGTTTAAGGTATGTACCTACCAAGAATAATAGAGAAAGAAAGAGATTAGAAAAGAAAACTCGTGAACTAATTCAAGTGTTGATTGAAGATAACCATAAAGCACAAAATAATTCAGAAAACTTGCTCACTTTGTTAATGTCTCCTCACAAATTTATCAACAATGAGACACAAAGGTTAGGAATGGATGAGATTATAGATAATTGTAAAAATTTCTATTTGGCAGGAAAGGAAACAAGTGCCAATTCAATAAGTTGGGCAATCCTACTTTTAGGAATGAATCAAGAATGGCAAAACAAGGTACGTGAGGAGGTACTTGCTGTTTTAGGACGTCATACACCCCCAACTGCTGAAACATTAAGTGGCCTCAAATTAGTGAGCTTGGTAATTCAGGAAACACTTAGACTTTACCCTATAGCAGGGATATTGGTGAGGCAAGCAAGTAAAAGAGTTACCATTGGGAACATTGATATCCTTGGTGGCACACAATTATACATGTCTATAATTTCAGTTCATCATGATACTAAAATATGGGGAGAAGATGCTCTTGAATTCAATCCTATGAGGTTTACAAAGCCCACAAAACATTCATCTTCTTCATATTTCCCATTTGGATTTGGCCCCAACTATTGTGTAGGTCAAAATTTAGCCATGATTGAAATGAAGATTGTTCTTGCTATGCTTTTGCAGAGATATTCTTTTTATGTTTCACCAACATATGTTCATGGACCAATGCTGGTTATGAGTGTATCACCTCAATATGGCATGCAAATTGTATTTAAAAGACTATGA 1515 0.369 MAHLLLLLIFILLLVFIARITYSIIWLPWIITRHFHKQNIRGPPYRLIKGNVDEINRMFAEVQSKPMELCHDIVQHVFPYYHRWASVYGKTVLSWYGSRPRLILSDPIIIKEALLKTGEWFEKMDPNPLSKQFYGEGILFSKGKKWTTYRSIANHAFKMERIKSWIPQIIDTTKLMFYKWEDENNVNEEFEIDVNKDLHNLSADIISRVAFGSSYEEGKEIFDLQDQHCHLASLAQRSAYFPGLRYVPTKNNRERKRLEKKTRELIQVLIEDNHKAQNNSENLLTLLMSPHKFINNETQRLGMDEIIDNCKNFYLAGKETSANSISWAILLLGMNQEWQNKVREEVLAVLGRHTPPTAETLSGLKLVSLVIQETLRLYPIAGILVRQASKRVTIGNIDILGGTQLYMSIISVHHDTKIWGEDALEFNPMRFTKPTKHSSSSYFPFGFGPNYCVGQNLAMIEMKIVLAMLLQRYSFYVSPTYVHGPMLVMSVSPQYGMQIVFKRL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00213 504 Pfam Cytochrome P450 76 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 SUPERFAMILY Cytochrome P450 71 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 496 - -
Trre2g00213 504 Gene3D Cytochrome P450 29 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00213 504 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00213 Trre-Chr2 1800043 1803137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00213 22 504 Cytochrome P450 AT1G75130 48.560 1.96e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00213 - - tpra:123886278 932.554