Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00153 ATGTCTTTCAGCAAAGTCATTCTTCTTGTAACCGCTTTTCTTTCAGTTACACTTTCCCAAGCTCACCCTACAGGCTTCAACTTTGGATGGGGTGGTCATCATGGTGGAAGAACTAGAAGAATGTCTTTTGGTCTTTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTCTTGGAGAAGGCCATTGCTAAGGATATCAGAACAGCAGCTTCTCTTCTTCGACTTCACTTCCACGACTGCTTCGTCCAGGGTTGCGACGCGTCAATTTTGTTAGACGATAGTGCAACAATAGTCAGTGAGAAAAATGGCGGACCTAACAAAAATTCTGTCCGAGGTTATGATGTGATTGATGAGATCAAATCTAAGCTGGAACAAGCATGTCCTCGGACAGTCTCATGTGCAGACATTGTTGCTCTTGCTGCTAGAGGATCCACTGTTCTTAGTGGAGGACCCAACTGGGAGCTACCATTAGGAAGGAGAGACTCAAAAACTGCAAGCCTGAGGGGCTCAAACAAAAACATTCCCCCACCAAATGCCACCATTGAAGGTCTCTTATCATTTTTCAAGCGTCAAGGTCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGAGCACATACAATTGGTGTAGCAAGATGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAACAACCAACCAGATGAGAATCTAGAAAAAACATTTTACTTTGGTTTGAAAACAATGTGTCCAAAATCAGGTGGTGACAACATAATTTCTCCCTTGGACTTTGGTTCCCCAAGAATGTTTGATAATACCTATTACAAACTCTTACTTAGGGGAAAAGGATTGCTTAATTCAGATGAAGTGCTTCTCACAGGGAATGTTAAGGAGACTCATGAATTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTGAGCAATTTGCTTTGTCTATGATCAAGTTGGGAAATCTTCGTCCTCTCACTGGATTTAATGGTGAAGTTAGAAAGAATTGTCGTCGAGTTAATTAA 1041 0.415 MSFSKVILLVTAFLSVTLSQAHPTGFNFGWGGHHGGRTRRMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRTAASLLRLHFHDCFVQGCDASILLDDSATIVSEKNGGPNKNSVRGYDVIDEIKSKLEQACPRTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIEGLLSFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQNGNNQPDENLEKTFYFGLKTMCPKSGGDNIISPLDFGSPRMFDNTYYKLLLRGKGLLNSDEVLLTGNVKETHELVKKYAQDESLFFEQFALSMIKLGNLRPLTGFNGEVRKNCRRVN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00153 346 CDD secretory_peroxidase 44 345 IPR033905 GO:0004601|GO:0042744
Trre2g00153 346 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PANTHER PEROXIDASE 72-RELATED 44 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 ProSiteProfiles Plant heme peroxidase family profile. 44 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 Gene3D - 49 346 - -
Trre2g00153 346 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Trre2g00153 346 Gene3D Peroxidase, domain 2 182 326 - -
Trre2g00153 346 FunFam Peroxidase 48 188 - -
Trre2g00153 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Trre2g00153 346 FunFam Peroxidase 182 325 - -
Trre2g00153 346 Pfam Peroxidase 63 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00153 346 SUPERFAMILY Heme-dependent peroxidases 44 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00153 Trre-Chr2 1345328 1347217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00153 1 346 Peroxidase AT1G44970 71.143 7.19e-178 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00153 K00430 - gmx:102660391 580.482