Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00144 ATGGCTGATTTAGGTTCAGCTTCTTCTAAGAGAATGTGGTGTTCAATTCCAGAAAGGTTTCAACTGCATGTGGCCATGTTGGCCTTGCAGTTTGGTTATGCTGGTTTCCATGTTGTCTCAAGAGCTGCCCTTAACATGGGAGTTAGCAAACTTGTTTTTCCTGTTTATAGGAACATCATTGCTCTGCTTCTCCTCCTTCCATTTGCATATTTCTTGGAAAAGAAAGACAGACCACCAATTAATTTGAACTTCCTTTGCCAGTTCTTTTTTCTAGCACTTATTGGGATTACAGCAAACCAAGGTTTCTATTTGCTTGGCTTAGACAACACATCCCCTACCTTTGCATCAGCAATACAAAACTCTGTCCCTGCCATTACATTTCTCATGGCAGTCATCCTAAGGATAGAGCAAGTGAAACTGAATAGAAAAGATGGAATAGCTAAAGTAGCAGGAACAATATTTTGTGTAATTGGTGCAACAGTGATTACATTATACAAAGGTCCAACAATATATAGTCCAACACCAAGTAATCACTTAACTAGCAACACAACAATAACACCTACGATTGATTTTGGTACAATGTCATTGGGTGATGCAAAAGGAAAAAATTGGACACTTGGATGTTTGTATTTGATTGGACATTGTTTGTCTTGGTCTGGTTGGCTTGTGTTCCAAGCACCTGTCCTTAAGAAGTACCCTGCTCGTCTCTCTGTTACTTCTTATACATGTTTCTTTGGTCTCTTGCAATTTCTTCTTATTGCTTTGGTTGCTGAAAGAAATGCTCAAGCTTGGATTTTTCACTCTGGTGGAGAAGCTTTCACCATTTTATACGCGGGAGTTGTGGCATCTGGAATTGCTTTTGCAGTACAGATATGGTGTATTGATAGAGGAGGTCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAAACTTTTGTTGTTGCTATTATGGCTTCTCTTGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATTATTGGGGCAGTGTTGATAGTAGCTGGACTATACTTTGTATTGTGGGGTAAAAGTGAAGAGAAGAAATTTGCAAAGGAACAGCTTGCAATTGCATCATCCACTGCAGAACATAGTAGCATCATTAGACCCGCAAGCCATGCTAAAGCATCATCACTCACTCAACCATTCCTCTCTTCATCAACAGAAAATGTTTGA 1185 0.3983 MADLGSASSKRMWCSIPERFQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKDRPPINLNFLCQFFFLALIGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVKLNRKDGIAKVAGTIFCVIGATVITLYKGPTIYSPTPSNHLTSNTTITPTIDFGTMSLGDAKGKNWTLGCLYLIGHCLSWSGWLVFQAPVLKKYPARLSVTSYTCFFGLLQFLLIALVAERNAQAWIFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASLALGEEFYLGGIIGAVLIVAGLYFVLWGKSEEKKFAKEQLAIASSTAEHSSIIRPASHAKASSLTQPFLSSSTENV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00144 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Trre2g00144 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 348 - -
Trre2g00144 394 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Trre2g00144 394 Pfam EamA-like transporter family 206 344 IPR000620 GO:0016020
Trre2g00144 394 PANTHER WAT1-RELATED PROTEIN 24 357 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00144 Trre-Chr2 1259456 1262327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00144 1 394 Nodulin-like Gene Family AT1G75500 73.618 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00144 - - tpra:123886836 718.768