Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00107 ATGGAGTTTCTTGTGCTTTTTTCTCTCTTTCTAATCTTTATTCTATTCATCATCCATATACACAAATCAAATAGTACTAGAAGAACATCATCAACTCCACCAGGTCCTAAACCACTTCCTATAATTGGAAATCTACACCAAATTGACCCTTCATCACCACATCAATCCTTATGGCAACTTTCCAAGCAATATGGACCTATCATGTATTTACACCTTGGCTATATCCCAACCTTAGTTGTTTCTTCATCCAAAATGGCAAAAGAAGTGTTGCAAACCCATGACCTTAAATTTGCAAGTAGACCATCTTTTGTAGGACTAAGGAAATTGTCTTACAATGGTTTAGATTTGGGTTTTGCACCTTATAGTCCTTATTGGAGAGAAATGAAAAAAATTTGTGTTCTTCATCTTTTTAGCTCTCAACGTGTTCATTCTTTTAGACCCATTAGAGAAAATGAAGTGGCCCAATTGATTCAAACGGTGTCAAAATACGTTGGTGATGAAAAAGGTGTGAACTTGAGTGAAACAATGATGTCTTTCACAAATACAATTATATGTAAGATGGCTTTTGGGAAAAAATATGATTTTGATTATGATGAAGAAGTTGAATTGGGAAATGGACAAAGGAGAAGTAGATTACAAATTTTGCTTAATGAAGCTCAAGCTTTGTTGACTGAATTTTACTTTTCAGATAGTTTTCCTTTGTTGGGTTGGGTTGATAGAGTTAGAGGAACTCTTAGTAGGCTTGATAAAACTTTCAAGGAATTGGATTTGATATACCAAAGAGTCATTGATGATCATATGGATAATTTAGCAAGGCCTAAAAGCAAAGAACAAGAAGTAGTTGATATCATTGATATATTATTGCAGATGATGAATGATCACTCACTTCACTCACTTTCTTTTGAGCTCACTATTGACCACATCAAAGCTTTGCTTATGAACATCTTTATAGCAGGAACTGACACAAGTACAGCTATAGTGATTTGGGCTATGACAGCATTGATGAACAATCCTAGAGTGATGAACAAGGTTCAAATGGAAATCAGAAACTTATATAAAGACAAAGATTTTATAAATGAAGATGATATTGAAAAGCTTCCTTATCTTAAATTAGTGCTGAAAGAAACAATGAGATTATTCCCTCCATCACCACTACTACTGCCAAGAGAAACAATAGAAAGTTGTAACATAGATGGTTATGAGATTAAACCAAAAACTCTAGTGTATGTTAATGCATGGGCCATAGGAAGAGATCCTGAAAATTGGGAAGATCCAAAAGAGTTTTATCCAGAAAGATTCTTCACAAGTTCGGTGGATTTTAAAGGGAAGAATTTTGAGCTGATTCCATTTGGAAGTGGAAGGAGAATGTGTCCTGCAATGAACATGGGAATGCTCACTGTTGAGCTTTCACTTGCTAATCTTATTCACTCTTTTGATTGGAAATTGCCTAATGATTTTGATAAGGAACAAGTGTTGGATACACAGGTGAAACCAGGAATAACTATGCATAAGAAAATTGATCTTTATCTTGTTCCAAAGAAAAGGAAACCATAA 1554 0.3443 MEFLVLFSLFLIFILFIIHIHKSNSTRRTSSTPPGPKPLPIIGNLHQIDPSSPHQSLWQLSKQYGPIMYLHLGYIPTLVVSSSKMAKEVLQTHDLKFASRPSFVGLRKLSYNGLDLGFAPYSPYWREMKKICVLHLFSSQRVHSFRPIRENEVAQLIQTVSKYVGDEKGVNLSETMMSFTNTIICKMAFGKKYDFDYDEEVELGNGQRRSRLQILLNEAQALLTEFYFSDSFPLLGWVDRVRGTLSRLDKTFKELDLIYQRVIDDHMDNLARPKSKEQEVVDIIDILLQMMNDHSLHSLSFELTIDHIKALLMNIFIAGTDTSTAIVIWAMTALMNNPRVMNKVQMEIRNLYKDKDFINEDDIEKLPYLKLVLKETMRLFPPSPLLLPRETIESCNIDGYEIKPKTLVYVNAWAIGRDPENWEDPKEFYPERFFTSSVDFKGKNFELIPFGSGRRMCPAMNMGMLTVELSLANLIHSFDWKLPNDFDKEQVLDTQVKPGITMHKKIDLYLVPKKRKP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00107 517 Pfam Cytochrome P450 33 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 SUPERFAMILY Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 FunFam Cytochrome P450 83B1 19 511 - -
Trre2g00107 517 CDD CYP71-like 63 508 - -
Trre2g00107 517 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00107 517 PANTHER CYTOCHROME P450 71B11-RELATED 15 513 - -
Trre2g00107 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre2g00107 517 Gene3D Cytochrome P450 22 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00107 Trre-Chr2 850529 852954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00107 27 514 Cytochrome P450 AT3G26330 47.035 4.11e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00107 - - gmx:606704 671.389