Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00106 ATGGGGTACTTTCTTGTGCTTCTTTCTCTCTTGCCAATCTTTATTCTATTGACCATCCATATACACAAATTAAAGATTAGTAGAAGAACATCATCAATTCCACCACCGCCGGGTCCTAAACCACTTCCTATAATTGGAAATCTGCACCAAATTGACCCTTCATCACCACATCAATCCTTATGGCAACTTTCCAAACACTATGGACCTATCATGTATTTGCACCTTGGCTATATCCCAACCTTAGTTGTTTCCTCATCCAAAATGGCAAAACAAGTGTTGCAAACCCATGACCTTAAATTTGCAAGTAGACCATCTTTCCTAGGACTAAGAAAATTGTCTTATAATGGTTTAGATTTAGCTTTTGCACCTTATAGCCCTTATTGGAAAGCAATGAAAAAACTTTGTGTTCTTCATCTCTTTAGCTCTCAACGTGTTCATTCTTTTAGACCCATTAGAGAAAATGAAGTGGCCCAATTGATTCAAAAGGTGTCACAATATGATGATGATGAAAAAGGTCTGAACTTGAGTGAAACAATGATGTCTTTCACAAATACACTTATATGTAAGATAGCTTTAGGAAAAAGATATGTTTTTGATTATGAGGAAGAAGTTAAATTGGGAAGTGAACAAAGGAGAAGTAGATTGCAAATTTTGCTTCATGAAGCTCAAGCATTGATGACTGAATTTTACTTTTCAGATCATTTTCCTTTGTTGGGTTGGGTTGATAGAATCAAAGGAACTCTTTGGAAGCTTGATAAAACTTTCAAGGAATTGGATTTGATATACCAAAGAGTGATTGATGATCATATGGATAATTTAGGAAGGCCTAAAAGCAAGGAACAAGATGTGGCTAATATCATTGATATATTATTGCAGATGATGAATGATCACTCACTTTCTTTTGAGCTCACTCTTGACCACATCAAAGCATTGCTTATGGACATCTTTATAGGAGGAACCGACACAAGTACAGCAACAGTGGTTTGGGCTATGACAGCATTGATGAACAATCCTAGAGTGATGAACAAGGTCCAAATGGAAATCAGAAACTTATATGAAAACAAAGATTTCATAAATGAAGATGATATTGAAAAGCTTCCCTATCTTAAATCAGTGGTGAAAGAGACTTTGAGATTATTTCCTCCAACACCATTACTATTGCCAAGAGAAACTATACAAAATTGTAACATAGATGGTTATGAGATTAAACCAAAAACTCTTGTGTATATTAATGCATGGGCCATAGGAAGAGATCCTGAGAATTGGAAAGATTCTGAAGAGTTTTATCCCGAAAGATTCTCTATGAGTTCAGTTGATTTCATAGGGAATAATTTTGATTTGATTCCATTTGGAAGTGGAAGAAGAATGTGTCCAGGAATGAACATGGCAGCGCGCAATGTTGAGCTTTCACTTGTTAATCTTGTTCACTCTTTTGAATGGAAATTGCCTAATGGTTTTGATAAGGAACAAGTGTTGGATACACAAGTCAAACCAGGAATCATTATGCATAAGAAAATTGATCTTTATCTTGTTCCTAAGAAAAGAAAACCATAG 1554 0.3533 MGYFLVLLSLLPIFILLTIHIHKLKISRRTSSIPPPPGPKPLPIIGNLHQIDPSSPHQSLWQLSKHYGPIMYLHLGYIPTLVVSSSKMAKQVLQTHDLKFASRPSFLGLRKLSYNGLDLAFAPYSPYWKAMKKLCVLHLFSSQRVHSFRPIRENEVAQLIQKVSQYDDDEKGLNLSETMMSFTNTLICKIALGKRYVFDYEEEVKLGSEQRRSRLQILLHEAQALMTEFYFSDHFPLLGWVDRIKGTLWKLDKTFKELDLIYQRVIDDHMDNLGRPKSKEQDVANIIDILLQMMNDHSLSFELTLDHIKALLMDIFIGGTDTSTATVVWAMTALMNNPRVMNKVQMEIRNLYENKDFINEDDIEKLPYLKSVVKETLRLFPPTPLLLPRETIQNCNIDGYEIKPKTLVYINAWAIGRDPENWKDSEEFYPERFSMSSVDFIGNNFDLIPFGSGRRMCPGMNMAARNVELSLVNLVHSFEWKLPNGFDKEQVLDTQVKPGIIMHKKIDLYLVPKKRKP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00106 517 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 Coils Coil 341 361 - -
Trre2g00106 517 Gene3D Cytochrome P450 28 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 PANTHER CYTOCHROME P450 71B11-RELATED 16 513 - -
Trre2g00106 517 FunFam Cytochrome P450 83B1 22 511 - -
Trre2g00106 517 CDD CYP71-like 67 508 - -
Trre2g00106 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre2g00106 517 Pfam Cytochrome P450 36 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00106 517 SUPERFAMILY Cytochrome P450 36 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00106 Trre-Chr2 846363 848604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00106 36 514 Cytochrome P450 AT3G26330 46.266 4.04e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00106 - - gmx:606704 640.958