Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00105 ATGGACCCTTCATCACCACATCAATCCTTATGGCAACTTTCCAAACACTATAATTGGAAATCTACACCACTTCCTATAATTGGAAATCTACACCAAATTGACCCTTCATCACCACATCAATCCTTATGGCAACTTTCCAAACACTATGGACCTATCATGTCTTTGCACCTTGGCAATATACCAACCTTAGTTGTTTCCTCAGCAAAAATGGCAAAAGAAGTGTTGAAAACACATGACCTTAAATTTGCAAGTAGACCATCTTTCCTAGGAGTAAGGAAATTGTCTTACAATGGTTTAGATTTGGGTTTTGCACCTTATAGTCCTTATTGGAGAGAAATGAAAAAAATTTGTGTTCTTCATCTTTTTAGCTCTCAACGTGTTTATTCTTTTAGACCCATTAGAGAAAATGAAGTTGCCCAATTGATTCAAAAGTTGTCACAATATGATGGTGATGAAAAAGGTGTGAACTTGAGTGAAACAATGATGTCTTTCACAAATACAATTATATGTAAGATGGCTTTTGGGAAAAAATATGATTTTGATTATGAGGAAGAAGTTGAATTGGGAAATGGACAAAGGGGAAGTAGATTGCAAGTTTTGCTTAATGATGCTCAAGCATTGTTAACTGAATTTTTCTTTTCAGATAGTTTTCCTTTGTTGGGTTGGGTTGATAGAGTTAGAGGAACTCTTAGGAGGCTTGATAAAACTTTCAAGGAATTGGATTTGATATACCAAAGAGTGATTGATGATCATATGGATAATTTAGGAAGGCCTAAAAGCAAGGAACAAGAGGTGGCTGATATCATTGATATATTTTTGCAGATGATGAATGATCACTCATTCTCTTTTGATCTTACTCTTGACCACATCAAGGCTGTGCTTATGAACATCTTTTTAGCAGGAACTGACACAAGTGCAGCAGTAGTAGTTTGGGCTATGACAACATTGATGAACAATCCTAGAGTGATGAACAAGGTCCAAATGGAAATCAGAAACTTATATGAAAACAAAGATTTCATAAATGAAGATGATATTGAAAAACTTCCTTATCTTAAATCAATGGTGAAAGAGACATTGAGATTATTCCCTCCATCACCATTACTATTGCCAAGAGAAACGATAGAAAATTGTAACATAGATGGTTATGAGATTAAACCTAAAACTCTTGTCCATGTTAATGCATGGGCCATAGGAAGAGATCCTGAGAATTGGGAAGACCCTGAAGAGTTTTATCCCGAAAGATTTTTTATGAGTTCAATTGATTTTAAAGGGAAGAATTTTGAGTTAATTCCATTTGGAAGTGGAAGAAGAATGTGTCCTGCAATGAACATGGGAGTTGTCACAGTTGAGCTTATACTTGCTAATCTTGTTCACTCTTTTGATTGGAAATTACCTAATGGTTTCGATAAAGAACAAATGTTGGATACACAAGTGAAGCCAGGAATCACTATGCATAAGAAAATTGATCTTTACCTTGTTCCTAGGAAAAGATCACTATAG 1500 0.3507 MDPSSPHQSLWQLSKHYNWKSTPLPIIGNLHQIDPSSPHQSLWQLSKHYGPIMSLHLGNIPTLVVSSAKMAKEVLKTHDLKFASRPSFLGVRKLSYNGLDLGFAPYSPYWREMKKICVLHLFSSQRVYSFRPIRENEVAQLIQKLSQYDGDEKGVNLSETMMSFTNTIICKMAFGKKYDFDYEEEVELGNGQRGSRLQVLLNDAQALLTEFFFSDSFPLLGWVDRVRGTLRRLDKTFKELDLIYQRVIDDHMDNLGRPKSKEQEVADIIDIFLQMMNDHSFSFDLTLDHIKAVLMNIFLAGTDTSAAVVVWAMTTLMNNPRVMNKVQMEIRNLYENKDFINEDDIEKLPYLKSMVKETLRLFPPSPLLLPRETIENCNIDGYEIKPKTLVHVNAWAIGRDPENWEDPEEFYPERFFMSSIDFKGKNFELIPFGSGRRMCPAMNMGVVTVELILANLVHSFDWKLPNGFDKEQMLDTQVKPGITMHKKIDLYLVPRKRSL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00105 499 Gene3D Cytochrome P450 13 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 Pfam Cytochrome P450 22 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 SUPERFAMILY Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PANTHER CYTOCHROME P450 71B11-RELATED 22 495 - -
Trre2g00105 499 CDD CYP71-like 49 490 - -
Trre2g00105 499 Coils Coil 323 343 - -
Trre2g00105 499 FunFam Cytochrome P450 83B1 8 493 - -
Trre2g00105 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Trre2g00105 499 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 70 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 164 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g00105 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00105 Trre-Chr2 841221 843632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00105 24 496 Cytochrome P450 AT4G31500 46.639 9.31e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00105 - - gmx:606704 670.233