Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00058 ATGGCAAATAAGATTAGATTCCAGCAGTGTTGCTCGTTGCAATTTCCCACCTTATATGGGAAAGATTTTAAAGGAGGGATTCCAACCGGAAGATTTAGTAATGGAAAAGTTCCCTCAGACCTCCTAGTTGAAGAATTAGGCATTAAAGAGCTTCTTCCAGCATACTTGGATCCAAATCTGCAGCCTAGTGATTTGCTTACTGGTGTGTGTTTTGCATCTGGTGGTGCTGGATATGATCCTTTGACATCTCAAACATCGTCAGCAATATCTTTATCTGGTCAACTAGACTTGTTCAAAGAATACATAGAAAAATTAAAATTACTTGTTGGAGAAGACAGAACAAAGTTCATCTTGGCAAATAGTGTTTTCCTTGTGGTATTAGGCAGCAATGACATTTCGAACACATACTTCTTATCTCGTATTAGACAAGTTCAGTATGATTTTCCTTCTTATGCTGATTTTATGGTCAACTCAGCATCTAATTTCTTAAAGGAAATATATGAATTAGGTGCAAGGAGGATTGGAGTATTCAATACACCACCAATCGGGTGTTTGCCATTTCAGAGAACAGCAGCTGGAGGAATAGAAAGAAGAATTGTAGTGGAATACAATGAAGCAGTAGAATTATACAACACCAAATTGTCAAAGGGGTTAGCTTCTTTTAATCACAACTACCCAGACAGCAGGATTGTTTACATTGATGTCTACAACCCTCTCCTTGATATCATTTTAAACTCCAATAAATACGGATATAAAGTGGAAGATAGAGGGTGCTGTGGCACGGGAATAATAGAGGTTGTGCTGTTATGCAACCATTTGGTTTCTACGTGTCCCAATGATATGGAGTTTGTCTTTTGGGATAGTTTTCATCCATCTGAAAGTGTTTACAAACGTCTCATAGCTCCTATTGTCCAAAAATACGTCAAAGATTTCCTGTGA 939 0.3781 MANKIRFQQCCSLQFPTLYGKDFKGGIPTGRFSNGKVPSDLLVEELGIKELLPAYLDPNLQPSDLLTGVCFASGGAGYDPLTSQTSSAISLSGQLDLFKEYIEKLKLLVGEDRTKFILANSVFLVVLGSNDISNTYFLSRIRQVQYDFPSYADFMVNSASNFLKEIYELGARRIGVFNTPPIGCLPFQRTAAGGIERRIVVEYNEAVELYNTKLSKGLASFNHNYPDSRIVYIDVYNPLLDIILNSNKYGYKVEDRGCCGTGIIEVVLLCNHLVSTCPNDMEFVFWDSFHPSESVYKRLIAPIVQKYVKDFL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00058 312 CDD SGNH_plant_lipase_like 19 307 IPR035669 -
Trre2g00058 312 PANTHER GDSL ESTERASE/LIPASE EXL3 18 301 - -
Trre2g00058 312 SUPERFAMILY SGNH hydrolase 121 303 - -
Trre2g00058 312 FunFam GDSL esterase/lipase APG 8 308 - -
Trre2g00058 312 Pfam GDSL-like Lipase/Acylhydrolase 27 299 IPR001087 GO:0016788
Trre2g00058 312 Gene3D SGNH hydrolase 5 309 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00058 Trre-Chr2 450065 453655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00058 19 305 Pollen Coat Proteome AT1G75910 40.000 4.66e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00058 - - gmx:100776651 466.848