Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00056 ATGAAGTTCCCAACTTATAATAATTCTTTTTCCACTATACTTCTCCGTTTGACAATATTGTTAGTTTTTATTGTGTTCAAAACAAAAGCTGTTACGAAACTGCCACCAAATGTTTCAATTCCAGCCGTGTTTGTGTTCGGAGATTCAATCATGGATACCGGAAACAACAACCACATGATAACACCATCTCAGTGTAATTACCCTCCATATGGCAAAGATTTTCAAGGAGGAATTCCAACCGGAAGATTTAGCAACGGAAAGGTTCCCTCGGATCTTATAGTTGAAGAATTAGGCATTAAAGAGTATCTGCCAGCATATTTGGATCCAAATCTCCAAACTAGTGATTTGCCTACAGGAGTCAACTTTGCATCTGGTGGTGCAGGATATGATCCTTTGACATCAAAATTAGGGGTAGCTATATCTATGTCTGGGCAGCTAGACTTATTCAAAGATTACATTGTGAAGCTTAAAGGAGTTGTTGGTGAAGATAGAGCAAACTTCATCTTAGGCAATAGTCTCTTTCTTGTGGTATTAGGAAGCAATGATATTTCCAACACATACTTCTTATCTCGTATTAGACAAGCTCAATATGATTTTCCTACATACTCTGACATTTTAGTCAACTCAGCTTATAATTTCTATCAGGAATTGTATGAACTAGGTGCAAGGAGAATTGGAGTGTTTAATGCACCACCAATGGGGTGTGTACCATTTCAGAGAACAATGGCTGGTGGGATAGAAAGAAAATGTGTACAAGAGTACAATGATGCAGCTGTGTTCTTTAACAACAAGTTGTCAATAGGGATTGATAATTTTCAGCAGAATTTTCCAAATAGCAGGATTGCTTACTTGGATGTTTACAACCCTCTACTTGATATCATTGTAAACAACAAAAAATATGGCTATAAATTTGGAGACAGAGGATGTTGTGGCACAGGCAAAATAGAAGTTACTTATTTATGCACCCATTTGGAAGGAATTTGTTCCAACGATTTGGATTATGTGTTTTGGGACAGTTTTCATCCTACTGAATCTGTTTACAGAAAACTTGTTACCCCTATTCTACACAAATACATGGACAAATTTATTTAG 1092 0.3663 MKFPTYNNSFSTILLRLTILLVFIVFKTKAVTKLPPNVSIPAVFVFGDSIMDTGNNNHMITPSQCNYPPYGKDFQGGIPTGRFSNGKVPSDLIVEELGIKEYLPAYLDPNLQTSDLPTGVNFASGGAGYDPLTSKLGVAISMSGQLDLFKDYIVKLKGVVGEDRANFILGNSLFLVVLGSNDISNTYFLSRIRQAQYDFPTYSDILVNSAYNFYQELYELGARRIGVFNAPPMGCVPFQRTMAGGIERKCVQEYNDAAVFFNNKLSIGIDNFQQNFPNSRIAYLDVYNPLLDIIVNNKKYGYKFGDRGCCGTGKIEVTYLCTHLEGICSNDLDYVFWDSFHPTESVYRKLVTPILHKYMDKFI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00056 363 Pfam GDSL-like Lipase/Acylhydrolase 43 351 IPR001087 GO:0016788
Trre2g00056 363 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 43 54 IPR008265 GO:0006629|GO:0016298
Trre2g00056 363 Gene3D SGNH hydrolase 31 358 IPR036514 -
Trre2g00056 363 PANTHER GDSL ESTERASE/LIPASE EXL3 24 352 - -
Trre2g00056 363 CDD SGNH_plant_lipase_like 41 358 IPR035669 -
Trre2g00056 363 FunFam GDSL esterase/lipase APG 32 359 - -
Trre2g00056 363 SUPERFAMILY SGNH hydrolase 42 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00056 Trre-Chr2 444528 446506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00056 19 356 Pollen Coat Proteome AT1G75910 39.474 8.56e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00056 - - gmx:100776769 526.939