Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00055 ATGGATACTGGAAATAATAACAACATGACAACACCATCTAGGTGCAATTACCCTCCATATGGCAAAGATTTTCAAGGAGGTATTCCAACAGGGAGATTTAGCAACGGAAAGGTTCCATCAGATCTTATAGTTGAAGAATTGAGCATTAAAGAGTATTTGCCAGCATATTTGGATCCAAATCTCCATCCTAGTGAATTGGTCACAGGCGTTAACTTTGCATCAGGTGGTGCAGGATATGATCCTTTGACGTCAAAATTAGAGGCAGCTATATCTATGTCTGGGCAGCTAGACTTATTCAAAGATTACATTGTGAAGCTTAAAGGAGTTGTTGGTGAAGATAGAACAAACTTTATCTTAGCCAATAGTATTTTTTTTGTGGTATTAGGAAGCAATGATATTTCTAACACATACTACTTATCCCATTTGAGACAAGTGCACTATGATTTTCCTACATACTCTGACTTTTTAGTCAACTCAGCTTATAATTTCTACAAGGAAATATATGAACTAGGTGCAAGGAGGATTGGAGTATTCAATGTACCACCAATTGGGTGTGTGCCTTTTCAGAGAACAATGGCTGGTGGAATAACAAGAAAATGTGTGCAATTGTATGATGATGCAGTTGTGTTCTTTAACAACAAATTATCAATGGGGATTGATTCCTTTAAGCAGAACTTCCCAAGTAGCAACATTGTTTACATGGATATTTACAACCCTATACTTGATATCATTGTCAACTATAAAAAATATGGATATAAAATTGGAGACAGAGGGTGTTGTGGCACAGGCAAAATAGAAGTTACTTATTTGTGCAACCATTTGGATCCCATTTGTCCCAACGATTTGGATTATGTCTTTTGGGATAGTTTTCATCCTACTGAATCCGCTTACAGAAAACTTGTTGGTCCTATTCTACAAAAGTACATCCACAAGTTACTGTGA 942 0.3652 MDTGNNNNMTTPSRCNYPPYGKDFQGGIPTGRFSNGKVPSDLIVEELSIKEYLPAYLDPNLHPSELVTGVNFASGGAGYDPLTSKLEAAISMSGQLDLFKDYIVKLKGVVGEDRTNFILANSIFFVVLGSNDISNTYYLSHLRQVHYDFPTYSDFLVNSAYNFYKEIYELGARRIGVFNVPPIGCVPFQRTMAGGITRKCVQLYDDAVVFFNNKLSMGIDSFKQNFPSSNIVYMDIYNPILDIIVNYKKYGYKIGDRGCCGTGKIEVTYLCNHLDPICPNDLDYVFWDSFHPTESAYRKLVGPILQKYIHKLL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00055 313 FunFam GDSL esterase/lipase APG 1 309 - -
Trre2g00055 313 PANTHER GDSL ESTERASE/LIPASE EXL3 1 301 - -
Trre2g00055 313 CDD SGNH_plant_lipase_like 2 308 IPR035669 -
Trre2g00055 313 SUPERFAMILY SGNH hydrolase 122 305 - -
Trre2g00055 313 Pfam GDSL-like Lipase/Acylhydrolase 2 300 IPR001087 GO:0016788
Trre2g00055 313 Gene3D SGNH hydrolase 1 308 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00055 Trre-Chr2 438295 441250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00055 1 306 Pollen Coat Proteome AT1G75910 39.159 3.33e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00055 - - gmx:100777186 484.952