Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00054 ATGAAGTTCCCAACTTATTCTTTTTCCACTTCAATTTGCATTGCACTTTTCTTCCGTTTGACGATATTATGTTTAGTTGTTTTCTACAAAACAAAAGCTGCTTTGAAACTGCCACCAAATGCTTCAATTCCAGCAGTGTTTGTGTTTGGAGATTCAATCATGGATACTGGAAATAATAACAACATGACAACACCATCTAGGTGCAATTACCCTCCATATGGCAAAGATTTTCAAGGAGGTATTCCAACAGGGAGATTTAGCAACGGAAAGGTTCCATCAGATCTTATAGTTGAAGAATTGAGCATTAAAGAGTATTTGCCAGCATATTTGGATCCAAATCTCCATCCTAGTGAATTGGTCACAGGCGTTAACTTTGCATCAGGTGGTGCAGGATATGATCCTTTGACGTCAAAATTAGAGGCAGCTATATCTATGTCTGGGCAGCTAGACTTATTCAAAGATTACATTGTGAAGCTTAAAGGAGTTGTTGGTGAAGATAGAACAAACTTTATCTTAGCCAATAGTATTTTTTTTGTGGTATTAGGAAGCAATGATATTTCTAACACATACTACTTATCCCATTTGAGACAAGTGCACTATGATTTTCCTACATACTCTGACTTTTTAGTCAACTCAGCTTATAATTTCTACAAGGAAATATATGAACTAGGTGCAAGGAGGATTGGAGTATTCAATGTACCACCAATTGGGTGTGTGCCTTTTCAGAGAACAATGGCTGGTGGAATAACAAGAAAATGTGTGCAATTGTATGATGATGCAGTTGTGTTCTTTAACAACAAATTATCAATGGGGATTGATTCCTTTAAGCAGAACTTCCCAAGTAGCAACATTGTTTACATGGATATTTACAACCCTATACTTGATATCATTGTCAACTATAAAAAATATGGATATAAAATTGGAGACAGAGGGTGTTGTGGCACAGGCAAAATAGAAGTTACTTATTTGTGCAACCATTTGGATCCCATTTGTCCCAACGATTTGGATTATGTCTTTTGGGATAGTTTTCATCCTACTGAATCCGCTTACAGAAAACTTGTTGGTCCTATTCTACAAAAGTACATCCACAAGTTACTGTGA 1101 0.3633 MKFPTYSFSTSICIALFFRLTILCLVVFYKTKAALKLPPNASIPAVFVFGDSIMDTGNNNNMTTPSRCNYPPYGKDFQGGIPTGRFSNGKVPSDLIVEELSIKEYLPAYLDPNLHPSELVTGVNFASGGAGYDPLTSKLEAAISMSGQLDLFKDYIVKLKGVVGEDRTNFILANSIFFVVLGSNDISNTYYLSHLRQVHYDFPTYSDFLVNSAYNFYKEIYELGARRIGVFNVPPIGCVPFQRTMAGGITRKCVQLYDDAVVFFNNKLSMGIDSFKQNFPSSNIVYMDIYNPILDIIVNYKKYGYKIGDRGCCGTGKIEVTYLCNHLDPICPNDLDYVFWDSFHPTESAYRKLVGPILQKYIHKLL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00054 366 CDD SGNH_plant_lipase_like 44 361 IPR035669 -
Trre2g00054 366 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 IPR008265 GO:0006629|GO:0016298
Trre2g00054 366 FunFam GDSL esterase/lipase APG 35 362 - -
Trre2g00054 366 Gene3D SGNH hydrolase 33 361 IPR036514 -
Trre2g00054 366 PANTHER GDSL ESTERASE/LIPASE EXL3 24 354 - -
Trre2g00054 366 Pfam GDSL-like Lipase/Acylhydrolase 46 353 IPR001087 GO:0016788
Trre2g00054 366 SUPERFAMILY SGNH hydrolase 45 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00054 Trre-Chr2 438295 441409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00054 40 359 Pollen Coat Proteome AT1G75910 40.248 9.57e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00054 - - gmx:100786548 532.717