LGRPv2

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre2g00053	ATGGGTCGTGGAAGAATATCTATGGAACTTGTGCAAAAGGAGAAAACGAGGAAGAAAATATTTCTAATGAGAAAGAATGGTTTAATGAAAAAAGTGAATGAAATTTCTACTCTTTGTGATGTTGATGTTTGTGTGATTCTCTATGCTCCCAACTTTGAAGGGCAAGGATTTGTTGAACCTGAAACATGGCCTGAAGACACAAAAAAGGTACAAAGAATTCTTCAAAAGTACTACAATACAACAATTGATAGGCGTCCTTATAAGGTCTATGATGTTCAAGAGTATTTAAAAAAAAAGATGAAAATATTCGAATCTGAAATTTTCAAAGTGCACAAAGAGATGCTAAAGGTTATGTATCCATCGTGGAATGAATCTTTCAATTCTCTTAGAGAGGAACAATTGAGGTTATTTGCTAGCATCTTGGATTCAAAGGTTGATGCTTGTAATCAAAAGATGAATATGCTAAAAGGAGATGATAATGGAAAAGCAATAGCTGAATCACACAAGATTAATAAACTTAATACTCCTAATTTAACCTCAAATACAAGTAGCTACTTCAATCTCATGCAAAACAACTTATCTTACACTCCATTGATGGATATTAGTGATAAAAACCCCTTAGAGTTTTGGCCACTTGAATTGGGGCAGAGCTCTCAACCTTCTTCGATATTTTCCGGTGCACAAGCCTCTTATCAGGTGGAGTCTAAGGAGTCTTATCAATGCAAGCAAGTTGATGCTAATTGGGCTGATCAAATTGATGCTAATGTTACCTATGATCCTAAAATCGATACAAAAATGAAGAATGGAGCCGAAAACGATGAAAACTTGTCATCATACTATTACAATGGAAATACACCAGCAATGCAATCATATAATATTGCTATGCAGACTCTTCCAAACCCACCGTATGGATTTCAACTTAATGAATTTTATGATATATAG	942	0.3439	MGRGRISMELVQKEKTRKKIFLMRKNGLMKKVNEISTLCDVDVCVILYAPNFEGQGFVEPETWPEDTKKVQRILQKYYNTTIDRRPYKVYDVQEYLKKKMKIFESEIFKVHKEMLKVMYPSWNESFNSLREEQLRLFASILDSKVDACNQKMNMLKGDDNGKAIAESHKINKLNTPNLTSNTSSYFNLMQNNLSYTPLMDISDKNPLEFWPLELGQSSQPSSIFSGAQASYQVESKESYQCKQVDANWADQIDANVTYDPKIDTKMKNGAENDENLSSYYYNGNTPAMQSYNIAMQTLPNPPYGFQLNEFYDI	313

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Trre2g00053	313	CDD	MADS_SRF_like	2	78	IPR033897	GO:0000981\|GO:0000987\|GO:0045944
Trre2g00053	313	SMART	madsneu2	1	60	IPR002100	GO:0003677\|GO:0046983
Trre2g00053	313	SUPERFAMILY	SRF-like	2	100	IPR036879	GO:0003677\|GO:0046983
Trre2g00053	313	PRINTS	MADS domain signature	23	38	IPR002100	GO:0003677\|GO:0046983
Trre2g00053	313	PRINTS	MADS domain signature	38	59	IPR002100	GO:0003677\|GO:0046983
Trre2g00053	313	PRINTS	MADS domain signature	3	23	IPR002100	GO:0003677\|GO:0046983
Trre2g00053	313	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	12	51	IPR002100	GO:0003677\|GO:0046983
Trre2g00053	313	Gene3D	-	13	102	IPR036879	GO:0003677\|GO:0046983
Trre2g00053	313	ProSiteProfiles	MADS-box domain profile.	1	61	IPR002100	GO:0003677\|GO:0046983
Trre2g00053	313	PANTHER	MADS BOX PROTEIN	3	132	-	-

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre2g00053	Trre-Chr2	433834	434775	Wgd

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre2g00053	1	145	Type I MADS-box Gene Family	AT5G55690	37.671	4.74e-22	92.0

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-M-type	Trre2g00053		SRF-TF	1.1e-14	No_clan

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre2g00053	-		-	tpra:123913303	409.453

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