Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00048 ATGAATATTATCACAGGTTCTCCAATGATTTGTTCATTCTTCCTTCGTTTTCTCATTGTATTACTTGCTTTATGCCACAAAACAAATGGTGTGGTAAAGTTACCACCAAATGTTACGGTTCCAGCAGTGATAGCATTTGGAGATTCCATAGTCGACTCAGGAAATAACAACAACCTCAAAACTTTGGTCAAATGCAACTTCCCTCCTTATGGAAAAGATTTTCAAGGTGGTGTTTCAAGTGGTCGATTTTGCAATGGAAAAATTCCTTCAGACATACTAGCTGAAGAGTTGGGTATCAAGGGGTATGTCCCTGCATATTTGGATCCAAATCTCAAATCAAGTGATCTTCTTACAGGCGTAGGTTTTGCCTCCGGAGCTTCAGGATATGATCCTTTAACACCAAAAATAGCGTCGGTGATACCATTATCTGCTCAACTAGAAATGTTCAAAGAATACATAGGAAAGCTTAAAGGCATTGTTGGAGAGAAAAGAACAAACTTCATACTAGCCAACAGTCTTTTTCTTGTGGTGGGAGGTAGTGACGACATTGCCAACACATATTATGTTGTTCATGCCAGATTGCAATATGACATTCCTGCTTACACAGACCTTATGTCCAATTCAGCCATTCATTTTGTAAAGGAAATACATAAACTTGGAGCTCGTAGAATTGCTGTACTGAGTGCACCACCAATTGGATGTGTTCCATCACAGAGAACTCTTGCAGGAGGGATTGTAAGAGAATGTGCAGAAAAGTATAATGATGCTGCTAAGTTATTCAATGCCAAAATCTCAAAGGAGCTTGATTCCCTCAGTCACACCTCACCCAATAGCAGGATTGTTTACATTGATGTTTACACCCCTCTACTTGATATCATTCTCAACTACCAAAATTATGGGTACAAAGTTGTGGACAGAGGTTGTTGTGGCACAGGCAAACTAGAGGTTGCAGTGTTATGTAACCCTTTCGATGCTACTTGTTCTGATGCCTCAGAATATGTGTTTTGGGATAGTTACCATCCTACTGAACGAGTATACAGACAGCTCGTAGATATAGTCCTTCAAAAATATTTGAACAGATTGATCTGA 1089 0.3939 MNIITGSPMICSFFLRFLIVLLALCHKTNGVVKLPPNVTVPAVIAFGDSIVDSGNNNNLKTLVKCNFPPYGKDFQGGVSSGRFCNGKIPSDILAEELGIKGYVPAYLDPNLKSSDLLTGVGFASGASGYDPLTPKIASVIPLSAQLEMFKEYIGKLKGIVGEKRTNFILANSLFLVVGGSDDIANTYYVVHARLQYDIPAYTDLMSNSAIHFVKEIHKLGARRIAVLSAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNAKISKELDSLSHTSPNSRIVYIDVYTPLLDIILNYQNYGYKVVDRGCCGTGKLEVAVLCNPFDATCSDASEYVFWDSYHPTERVYRQLVDIVLQKYLNRLI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00048 362 PANTHER GDSL ESTERASE/LIPASE EXL3 19 351 - -
Trre2g00048 362 SUPERFAMILY SGNH hydrolase 43 357 - -
Trre2g00048 362 FunFam GDSL esterase/lipase APG 32 358 - -
Trre2g00048 362 Pfam GDSL-like Lipase/Acylhydrolase 43 350 IPR001087 GO:0016788
Trre2g00048 362 Gene3D SGNH hydrolase 34 358 IPR036514 -
Trre2g00048 362 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00048 Trre-Chr2 410132 414909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00048 37 361 Pollen Coat Proteome AT1G75910 38.602 3.18e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00048 - - ahf:112759151 577.015