Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00046 ATGGAGAAGTTAATGTGGGGGAGATTAGTGACAATATTTCTTGTTTTATTTGGTAGAGTATCCAACATTGCAATTGCACAAACTACCAATGCAGAATATCCTGCAGTGTTTGCATTTGGTGACTCAATCTTTGACACGGGAAATAATAACGGACTTTTCACCGCATCTAAGTGTAACTTTCCTCCGTATGGAAAGGATTTCTACGGAGGACAGGCTACCGGAAGATTCGGTAACGGCAGGGTGCTATCAGATTTGATAACTTCGGCTTTGGGAGTGAAAGCGACATTGCCAGCAGCCTTGAATCCATCTTTAACGCCGCAAGACCTTGTTACCGGGGTATGCTTTGCATCAGGTGGTTCTGGTTTTGATGATTTGACAGCAAACTTGCAGGGAGGAGTATTGACAATGGGGGCACAATTGAGATTATTCGAACAATACATAACAAGGCTTCGAGCAATTGTTGGAATAGAAAAAGCTGCTGATATCATATCAAAAGCTTTGTTTATAATATCAGCAGGAAACAATGATGTTGCATTTGCTTATTCTTTTACTATAAGGCATGTTTTGCCTTTCAATGTATATGGTGGTCAATTAGTTGGCGCAAGTCAAAATTTTCTCAAGAGTCTATATCAATTGGGCGCACGACACGTGTGGGTTTTTAGTACACTGCCATTGGGATGCTTACCTGCAGCTAGAACAATAACAGGACCATTAAGGTTATGTGTAGATTATGAGAATATATTGGCACAACAATTCAATGGTTGGTTAGCGAATGGGCTTGCAGCACTTAAGAGCACACTTCCAGATTATGATCTTAGATTTGCTGATGTGTATACACCAATGCTACGTCTCATACAGAATCCATCAGCAGCAGGGTTTGTAAATGTGTGGAATGGATGCTGTGGAACAGGAACATTTGAAATGGGACCAGCATGCAACATGTTAACATTCCAATGTCTAAGTGATGCAGCATACTTTTTTTGGGATGTTGCTCATCCTACTGAGAGAGCTTATCAAGCCACTGTTGCTCAATTGCTACACAAACAAAACTACGATCTTACTAGTTACAATATTTCCCAAACTCTTCATCCTTTGAATGTATCAAATCTTATCTTTTAA 1119 0.4004 MEKLMWGRLVTIFLVLFGRVSNIAIAQTTNAEYPAVFAFGDSIFDTGNNNGLFTASKCNFPPYGKDFYGGQATGRFGNGRVLSDLITSALGVKATLPAALNPSLTPQDLVTGVCFASGGSGFDDLTANLQGGVLTMGAQLRLFEQYITRLRAIVGIEKAADIISKALFIISAGNNDVAFAYSFTIRHVLPFNVYGGQLVGASQNFLKSLYQLGARHVWVFSTLPLGCLPAARTITGPLRLCVDYENILAQQFNGWLANGLAALKSTLPDYDLRFADVYTPMLRLIQNPSAAGFVNVWNGCCGTGTFEMGPACNMLTFQCLSDAAYFFWDVAHPTERAYQATVAQLLHKQNYDLTSYNISQTLHPLNVSNLIF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00046 372 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Trre2g00046 372 CDD SGNH_plant_lipase_like 34 348 IPR035669 -
Trre2g00046 372 Gene3D SGNH hydrolase 23 350 IPR036514 -
Trre2g00046 372 PANTHER GDSL ESTERASE/LIPASE EXL3 17 344 - -
Trre2g00046 372 Pfam GDSL-like Lipase/Acylhydrolase 36 341 IPR001087 GO:0016788
Trre2g00046 372 SUPERFAMILY SGNH hydrolase 37 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00046 Trre-Chr2 401038 402590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00046 10 347 Pollen Coat Proteome AT1G75910 39.193 2.11e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00046 - - mtr:11422775 600.512