Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00044 ATGGAGAGATTAATGTGGGTGAGATTAGTGACAATTTTTCTTGTTTTGTTGGGTAGATTATCCAACATTGCAATTGCACAAGCTACCAATGCAGCATTTCCAGCGGTGTTTGCATTTGGTGACTCAATCTATGACACTGGAAATAATAACAACCTTTTAACTGCATCTAAGTGTAACTTTCCTCCGTACGGAAAGGATTTCTACGGAGGACAGGCTACCGGAAGATTCGGCAATGGCCGAGTTCTATCAGATTTGATAACTTCGGCTTTGGGAGTGAAAGACACATTGCCAGCATACTTGAATCCAGCTTTAACGCCGCAAGACCTTCCTACCGGGGTATGCTTTGCATCAGGTGGTTCAGGTTTTGATGATTTGACAGCAAACATGCAGGGAGGAGTATTGACAATGGGGCAACAATTGAGATATTTCGAACAATACATAGAAAAGCTTAAAGCAGTTGTTGGAGCCGAAAAGGCAGCAGATATCATATCTAAAGCTTTGTTTATAATATCAGCAGGAAACAATGATGTTGCATTTGCTTATTCTTTTACTATAAGGAGAGCTTTGCCTTTCGATGTATATTGCGGTCAATTAGTTAGCGCAGCTCAAAATTTTCTTAAGAGTCTATATAAATTGGGAGCACGACACGTGTGGGTTCAAAGTACAGTGACATTGGGATGCTTACCTGCAGCTAGAACAATGACAGGACCATTAAGGTTATGTGTAGATTATGAGAATATGTACGCACAACAATTTAATGGCATGTTATCAGCAGGTGTTGCAAATCTTAAAGGCTCCCTTCCTGATTATGATCTTAGATTTGTTGATGTCTTTACTCCTATGCTTCGTCTCATTCAGAATCCTTTTGCAGCAGGGTTCGTAAATGTGTGGAACGGATGCTGTGGAACAGGAACATTTGAAATGGGACCAGCATGCAACATGTTAACATTCCAATGTCCAAGTACTGCACAATACTTTTTCTGGGATGTTGCTCATCCTACCGAGACAGCTTATCAAGCCACTCTTGCTCAATTGCTACATGCTCAAAACTATGATCTTACTAGTTACAATATTACCAAAACTCTTCATCCTTTGAATGTATCAAATCTTATTTTTTAA 1119 0.3977 MERLMWVRLVTIFLVLLGRLSNIAIAQATNAAFPAVFAFGDSIYDTGNNNNLLTASKCNFPPYGKDFYGGQATGRFGNGRVLSDLITSALGVKDTLPAYLNPALTPQDLPTGVCFASGGSGFDDLTANMQGGVLTMGQQLRYFEQYIEKLKAVVGAEKAADIISKALFIISAGNNDVAFAYSFTIRRALPFDVYCGQLVSAAQNFLKSLYKLGARHVWVQSTVTLGCLPAARTMTGPLRLCVDYENMYAQQFNGMLSAGVANLKGSLPDYDLRFVDVFTPMLRLIQNPFAAGFVNVWNGCCGTGTFEMGPACNMLTFQCPSTAQYFFWDVAHPTETAYQATLAQLLHAQNYDLTSYNITKTLHPLNVSNLIF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00044 372 PANTHER GDSL ESTERASE/LIPASE EXL3 16 343 - -
Trre2g00044 372 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Trre2g00044 372 Gene3D SGNH hydrolase 22 351 IPR036514 -
Trre2g00044 372 CDD SGNH_plant_lipase_like 34 348 IPR035669 -
Trre2g00044 372 Pfam GDSL-like Lipase/Acylhydrolase 36 340 IPR001087 GO:0016788
Trre2g00044 372 SUPERFAMILY SGNH hydrolase 36 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00044 Trre-Chr2 395542 397248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00044 12 347 Pollen Coat Proteome AT1G75910 40.698 7.81e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00044 - - mtr:11422775 605.52