Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00039 ATGGCATCATCAGCTATTGGAATGGTGATCATGGTGATGATGGTGTGCTCAACTTGTATTAATGCAAGTGCACTAAGTGTGAATTACTATAAGCATACATGCCCTCAGGTAGAATCCATCGTGGCAGGTGCAGTACACAAAGCAACCTTAAATGATAAAACAGTACCAGCTGCTCTGCTTCGCATGCATTTTCATGATTGCTTCATAAGGGGGTGTGATGGGTCTGTTCTGTTGAAATCAAAGGGAAAGAATAAAGCAGAAAAGGATGGGCCTGCTAACATATCATTGCATGCATTCTATGTAATTGAGAACGCTAAGAAAGCATTGGAAGCCATTTGTCCAGGGGTCGTATCTTGTGCTGATATTTTGGCTCTTGCTGCTAGAGACGCTGTCACTCTGTCTGGAGGGCCAAGTTGGGAAGTACCAAAAGGAAGAAAGGATGGTAGAATCTCAAAGGCTGCTGAAACTAGACAATTGCCAGCTCCAACTTTCAACATCTCCCAATTACAACAAAGTTTCTCTCAAAGAGGACTTTCCTTGCAAGATCTTGTTGCCCTCTCAGGAGGACACACCCTGGGGTTTGCTCATTGTTCATCCTTCCAAAACAGAATCCACAAATTCAGCTCCAAACAAAGCATTGACCCATCCTTGAACCCATCATTTGCAAACACACTCCAAAGCAAATGCCACATTAACAACAAGGTCAAAAATGCAGGGTCCACATTGGATTCAAGTGCCACATATTTTGATAATGCTTATTATAAACAACTGCTCCAAGGAGAAAGCATACTCTCTTCCGATCAAGCACTACTCACTCACCCAACCACTAAAGCATTGGTTTCCAAATATGCTCATTCCCAAATGGAATTTGAAAGAGCTTTTGTCAAATCCATGATCAAAATGAGTAGCATTACCAATGGTGGACAAGAGATCAGGCTCCACTGCAATCTCGTTAGATAA 960 0.4229 MASSAIGMVIMVMMVCSTCINASALSVNYYKHTCPQVESIVAGAVHKATLNDKTVPAALLRMHFHDCFIRGCDGSVLLKSKGKNKAEKDGPANISLHAFYVIENAKKALEAICPGVVSCADILALAARDAVTLSGGPSWEVPKGRKDGRISKAAETRQLPAPTFNISQLQQSFSQRGLSLQDLVALSGGHTLGFAHCSSFQNRIHKFSSKQSIDPSLNPSFANTLQSKCHINNKVKNAGSTLDSSATYFDNAYYKQLLQGESILSSDQALLTHPTTKALVSKYAHSQMEFERAFVKSMIKMSSITNGGQEIRLHCNLVR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00039 319 PANTHER PEROXIDASE 25-RELATED 15 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 FunFam Peroxidase 160 301 - -
Trre2g00039 319 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 CDD secretory_peroxidase 25 318 IPR033905 GO:0004601|GO:0042744
Trre2g00039 319 Gene3D Peroxidase, domain 2 160 301 - -
Trre2g00039 319 Gene3D - 28 318 - -
Trre2g00039 319 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Trre2g00039 319 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g00039 319 FunFam Peroxidase 28 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00039 Trre-Chr2 359426 360648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00039 1 319 Peroxidase AT5G42180 70.219 5.28e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00039 K00430 - gmx:100820056 508.834