Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00034 | ATGGGATTAGGATTGTTCAAGGCTTTTTTTTGTTGTACCACAAATCAAGACATTCCCATTGTTTCCTCCGACTCAGAGTCCTCTCCTCGGCATAGCTCTGGCTATGGCTACAAACAACCAATGCTGCCAATTAGTCCCAAAAAATCTCCATCTTCTACAAGTAATCCACAAATTGGACAAATTCTAGGGAAACCATACGTTGTGATAAACCAAATGTACGAGATGAAGAAAGAGCTCGGACGGGGTCAATCAGGCGTGACATATCTTTGTACAGAGAAAAGAACTGGGAGAGAATACGCGTGCAAATCGATATCAAGGGCAAAACTATTGAGTGATCAAGAGATAGAAGATGTAAGAAGAGAGGTTATGATTCTGCAACATCTCTCGGGGCAACCAAATATAGTTGAATTCAGAGGAGCTTATGAGGACAAACAGAATGTGCATTTGGTGATGGAGGTTTGCAAAGGAGGTGAACTTTTCGATCGAATTATTGCTAAAGGGAACTATACGGAGCGCGAAGCTGCTACTATCATGAGACAGATTGTGAATGTGGTGCATGTGTGTCATTTCATGGGTGTTCTGCATCGTGATCTTAAGCCTGAGAATTTCTTGCTTGCTTCACAGGATGAGAATGCTACTGTTAAAGCTACTGATTTTGGACTCTCCATTTTCCTCGAAGAAGGTACTTATTTATTACAGTAG | 702 | 0.4145 | MGLGLFKAFFCCTTNQDIPIVSSDSESSPRHSSGYGYKQPMLPISPKKSPSSTSNPQIGQILGKPYVVINQMYEMKKELGRGQSGVTYLCTEKRTGREYACKSISRAKLLSDQEIEDVRREVMILQHLSGQPNIVEFRGAYEDKQNVHLVMEVCKGGELFDRIIAKGNYTEREAATIMRQIVNVVHVCHFMGVLHRDLKPENFLLASQDENATVKATDFGLSIFLEEGTYLLQ | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00034 | 233 | MobiDBLite | consensus disorder prediction | 21 | 57 | - | - | |
Trre2g00034 | 233 | SUPERFAMILY | Protein kinase-like (PK-like) | 73 | 228 | IPR011009 | - | |
Trre2g00034 | 233 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 70 | 226 | - | - | |
Trre2g00034 | 233 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00034 | 233 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 232 | - | - | |
Trre2g00034 | 233 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 102 | IPR017441 | GO:0005524 | |
Trre2g00034 | 233 | ProSiteProfiles | Protein kinase domain profile. | 73 | 233 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00034 | 233 | Gene3D | Phosphorylase Kinase; domain 1 | 75 | 158 | - | - | |
Trre2g00034 | 233 | SMART | serkin_6 | 73 | 233 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00034 | 233 | Pfam | Protein kinase domain | 73 | 228 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00034 | 233 | FunFam | Calcium-dependent protein kinase 1 | 75 | 158 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00034 | Trre-Chr2 | 323817 | 324518 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00034 | 36 | 228 | EF-hand Containing Proteins | AT1G50700 | 63.731 | 2.62e-86 | 262 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Trre2g00034 | Pkinase | 1.5e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00034 | K13412 | - | gmx:100816157 | 330.872 |