Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00034 ATGGGATTAGGATTGTTCAAGGCTTTTTTTTGTTGTACCACAAATCAAGACATTCCCATTGTTTCCTCCGACTCAGAGTCCTCTCCTCGGCATAGCTCTGGCTATGGCTACAAACAACCAATGCTGCCAATTAGTCCCAAAAAATCTCCATCTTCTACAAGTAATCCACAAATTGGACAAATTCTAGGGAAACCATACGTTGTGATAAACCAAATGTACGAGATGAAGAAAGAGCTCGGACGGGGTCAATCAGGCGTGACATATCTTTGTACAGAGAAAAGAACTGGGAGAGAATACGCGTGCAAATCGATATCAAGGGCAAAACTATTGAGTGATCAAGAGATAGAAGATGTAAGAAGAGAGGTTATGATTCTGCAACATCTCTCGGGGCAACCAAATATAGTTGAATTCAGAGGAGCTTATGAGGACAAACAGAATGTGCATTTGGTGATGGAGGTTTGCAAAGGAGGTGAACTTTTCGATCGAATTATTGCTAAAGGGAACTATACGGAGCGCGAAGCTGCTACTATCATGAGACAGATTGTGAATGTGGTGCATGTGTGTCATTTCATGGGTGTTCTGCATCGTGATCTTAAGCCTGAGAATTTCTTGCTTGCTTCACAGGATGAGAATGCTACTGTTAAAGCTACTGATTTTGGACTCTCCATTTTCCTCGAAGAAGGTACTTATTTATTACAGTAG 702 0.4145 MGLGLFKAFFCCTTNQDIPIVSSDSESSPRHSSGYGYKQPMLPISPKKSPSSTSNPQIGQILGKPYVVINQMYEMKKELGRGQSGVTYLCTEKRTGREYACKSISRAKLLSDQEIEDVRREVMILQHLSGQPNIVEFRGAYEDKQNVHLVMEVCKGGELFDRIIAKGNYTEREAATIMRQIVNVVHVCHFMGVLHRDLKPENFLLASQDENATVKATDFGLSIFLEEGTYLLQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00034 233 MobiDBLite consensus disorder prediction 21 57 - -
Trre2g00034 233 SUPERFAMILY Protein kinase-like (PK-like) 73 228 IPR011009 -
Trre2g00034 233 PANTHER SERINE/THREONINE-PROTEIN KINASE 70 226 - -
Trre2g00034 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Trre2g00034 233 Gene3D Transferase(Phosphotransferase) domain 1 159 232 - -
Trre2g00034 233 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Trre2g00034 233 ProSiteProfiles Protein kinase domain profile. 73 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00034 233 Gene3D Phosphorylase Kinase; domain 1 75 158 - -
Trre2g00034 233 SMART serkin_6 73 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00034 233 Pfam Protein kinase domain 73 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00034 233 FunFam Calcium-dependent protein kinase 1 75 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00034 Trre-Chr2 323817 324518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00034 36 228 EF-hand Containing Proteins AT1G50700 63.731 2.62e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre2g00034 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00034 K13412 - gmx:100816157 330.872