Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00026 ATGGCGTCGCCAGCAGCAGTTAAAGTGTACGGACCAGCCTTGTCGACCGCCGTTTCAAGAGTGCTGGCATGTCTGAACGAGAAAGACATCCCATTTCAACTCATCTCTCTCAACATGTCCAAAGGAGAACACAGAAACCCTGATTTCCTCAAAATCCATCCCTTTGGCCAAGTACCTGCATTTCAAGATGACCACATATCTCTCTTCGAGTCTAGAGCGATATGCCGGTACGTTTGTGAGAAACACGGAGACAAAGGAAACAAGGAACTGTACGCATTCGCTCCTCGAATGAAGATCAAGCAAGACCAAGGAGCAATCAGACAGAGTAAAGAAAAGCTGAAGAAAGTGCTTGATGTGTACGATAAGAGGCTCGGTGAAACTCGTTACTTGGCCGGTGATGAATTCACACTCGCTGATCTTTCGCATCTTCCCAATATTCATTACTTGGTGGCTTCCGCTGATGATGATGATGATGATGACACGGCTGCTCTGTTCACCTCTTCAAGAGAAAATGTGTCCAGGTGGTGGACGGATATATCCACGCGTCACTCATGGACAAAGGTCATTGATTTGCACCCTAAACCTTGA 588 0.4677 MASPAAVKVYGPALSTAVSRVLACLNEKDIPFQLISLNMSKGEHRNPDFLKIHPFGQVPAFQDDHISLFESRAICRYVCEKHGDKGNKELYAFAPRMKIKQDQGAIRQSKEKLKKVLDVYDKRLGETRYLAGDEFTLADLSHLPNIHYLVASADDDDDDDTAALFTSSRENVSRWWTDISTRHSWTKVIDLHPKP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00026 195 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 68 195 IPR010987 -
Trre2g00026 195 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Trre2g00026 195 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Trre2g00026 195 FunFam Glutathione S-transferase F2 6 90 - -
Trre2g00026 195 Pfam Glutathione S-transferase, C-terminal domain 97 181 IPR004046 -
Trre2g00026 195 Gene3D Glutaredoxin 6 89 - -
Trre2g00026 195 PANTHER GLUTATHIONE S-TRANSFERASE RHO 6 90 - -
Trre2g00026 195 CDD GST_N_Phi 6 81 - -
Trre2g00026 195 SFLD Glutathione Transferase (cytosolic) 8 97 IPR040079 -
Trre2g00026 195 SUPERFAMILY Thioredoxin-like 5 86 IPR036249 -
Trre2g00026 195 FunFam Glutathione S-transferase F2 89 189 - -
Trre2g00026 195 Gene3D - 90 189 - -
Trre2g00026 195 SUPERFAMILY GST C-terminal domain-like 91 189 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00026 Trre-Chr2 282807 283691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00026 6 191 Glutathione S-transferase Gene Family AT3G03190 38.710 2.01e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00026 K00799 - zju:107422694 267.7