Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00025 ATGCATGAAATCACAATTTCAACCAGCGATAAGCCAAAACTTTTCAGTCAGTTGACTACCTTACTCTCTGAGATTGGGCTGAATATTCAAGAAGCACATGCTTTTTCCACATTGGATGGATATTCATTAGATGTTTTTGTTGTTGATGGTTGGGTAGGCAAGGATACTGAGAGACTCAAGCATGAAGTGACAAAGAAAATGCAGAAACTTGAGGAAGATCAACGGTTCCCCCTTCTCCCTTTTCGCAAGGAGACTGGGATACTAAAACATATTCCAACAAAGAAAATTAAGAAAATCGAGCCCTGGTGCAATCTTCCTAAGGAGAAACCAGAGAAAATTTGGATGAACTATATCTCTAACCATGTAAACAAACCCGTCAGTAGAAATTATGTGTGGGAAATTGATGCAAGCTGTTTAAGATACGAGAAGAAAATTGGCTCCGGATCCGTCAGTGATTTGTACAAAGGCACTTATATTAATAAAGATGTGGCTATCAAAGTATTTAAGAATGGTAGTCTAAATGAAAATATGCAGAGGGAGTTTTCTCAGGAAATATTTATCACGAGTAAAATTCAGCATAAGAATGTTATCAAATTTATTGGTGCCTGTGCAAAACCAAACTTTCATCTTGTCACAGAATATATGTCTGGTGGAAATATGTATGACTTTCTGCATATACAGAAGGTCATACTTACTCTTCCTTCTTTGCTCAAAATAGCAATTGATGTCTCCCAAGGAGTGAATTATTTACACAAAAACAATATTATACATCGAGACCTCAAAACTGCAAATCTTTTGATGGATGAGAAAGGGGTAGTCAAAGTCGCTGATTTTGGTGTAGCCAGATTGCAAAATCAATCTGGTATAATGACTGCAGAAACTGGAACATACCGATGGATGGCTCCAGAGGTTATTCAACATAAGCCATATAACCACAAAGCTGATGTTTTCAGCTTTGGGATTATTCTTTGGGAGCTGCTCACAAGAAAGCTTCCCTATGAAGATCTATCCCCATTGCAAGCAGCAATTGGAGTAGTACATAAGGATTTGAGGCCTGAAATCCCAAGGGATACTCATCCAAAGTTAGTGGAATTGATTCACCGGTGCTGGCATAAAGATCCGTGTTTAAGGCCCGATTTCTCAGAAATTCTCAAGTTTCTGCAGCACATTAACAACATGATAGCAGGCAAGAAGAAGGTTAAGGTTAAGGTTAAGGCTTAG 1221 0.3833 MHEITISTSDKPKLFSQLTTLLSEIGLNIQEAHAFSTLDGYSLDVFVVDGWVGKDTERLKHEVTKKMQKLEEDQRFPLLPFRKETGILKHIPTKKIKKIEPWCNLPKEKPEKIWMNYISNHVNKPVSRNYVWEIDASCLRYEKKIGSGSVSDLYKGTYINKDVAIKVFKNGSLNENMQREFSQEIFITSKIQHKNVIKFIGACAKPNFHLVTEYMSGGNMYDFLHIQKVILTLPSLLKIAIDVSQGVNYLHKNNIIHRDLKTANLLMDEKGVVKVADFGVARLQNQSGIMTAETGTYRWMAPEVIQHKPYNHKADVFSFGIILWELLTRKLPYEDLSPLQAAIGVVHKDLRPEIPRDTHPKLVELIHRCWHKDPCLRPDFSEILKFLQHINNMIAGKKKVKVKVKA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00025 406 FunFam Kinase suppressor of Ras 1 129 215 - -
Trre2g00025 406 CDD STKc_MAP3K-like 145 387 - -
Trre2g00025 406 ProSiteProfiles Protein kinase domain profile. 139 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00025 406 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 392 - -
Trre2g00025 406 ProSiteProfiles ACT domain profile. 3 81 IPR002912 -
Trre2g00025 406 SUPERFAMILY Protein kinase-like (PK-like) 114 387 IPR011009 -
Trre2g00025 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Trre2g00025 406 Gene3D Phosphorylase Kinase; domain 1 130 216 - -
Trre2g00025 406 Coils Coil 53 73 - -
Trre2g00025 406 SUPERFAMILY ACT-like 2 73 IPR045865 -
Trre2g00025 406 Pfam Protein tyrosine and serine/threonine kinase 140 387 IPR001245 GO:0004672|GO:0006468
Trre2g00025 406 SMART serkin_6 139 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g00025 406 PRINTS Tyrosine kinase catalytic domain signature 212 225 IPR001245 GO:0004672|GO:0006468
Trre2g00025 406 PRINTS Tyrosine kinase catalytic domain signature 295 305 IPR001245 GO:0004672|GO:0006468
Trre2g00025 406 PRINTS Tyrosine kinase catalytic domain signature 249 267 IPR001245 GO:0004672|GO:0006468
Trre2g00025 406 PRINTS Tyrosine kinase catalytic domain signature 358 380 IPR001245 GO:0004672|GO:0006468
Trre2g00025 406 PRINTS Tyrosine kinase catalytic domain signature 314 336 IPR001245 GO:0004672|GO:0006468
Trre2g00025 406 Gene3D Transferase(Phosphotransferase) domain 1 217 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00025 Trre-Chr2 275956 281089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00025 1 403 MAP Kinase Kinase Kinase AT4G35780 54.703 1.01e-158 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trre2g00025 PK_Tyr_Ser-Thr 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00025 - - vra:106761427 505.753