Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g00024 | ATGCATGAAATCACAATTTCAACCAGCGATAAGCCAAAACTTTTCAGTCAGTTGACTACCTTACTCTCTGAGATTGGGCTGAATATTCAAGAAGCACATGCTTTTTCCACATTGGATGGATATTCATTAGATGTTTTTGTTGTTGATGGTTGGGTAGGCAAGGATACTGAGAGACTCAAGCATGAAGTGACAAAGAAAATGCAGAAACTTGAGGAAGATCAACGGTTCCCCCTTCTCCCTTTTCGCAAGGAGACTGGGATACTAAAACATATTCCAACAAAGAAAATTAAGAAAATCGAGCAGCCCTGGTGCAATCTTCCTAAGGAGAAACCAGAGAAAATTTGGATGAACTATATCTCTAACCATGTAAACAAACCCGTCAGTAGAAATTATGTGTGGGAAATTGATGCAAGCTGTTTAAGATACGAGAAGAAAATTGGCTCCGGATCCGTCAGTGATTTGTACAAAGGCACTTATATTAATAAAGATGTGGCTATCAAAGTATTTAAGAATGGTAGTCTAAATGAAAATATGCAGAGGGAGTTTTCTCAGGAAATATTTATCACGAGTAAAATTCAGCATAAGAATGTTATCAAATTTATTGGTGCCTGTGCAAAACCAAACTTTCATCTTGTCACAGAATATATGTCTGGTGGAAATATGTATGACTTTCTGCATATACAGAAGGTCATACTTACTCTTCCTTCTTTGCTCAAAATAGCAATTGATGTCTCCCAAGGAGTGAATTATTTACACAAAAACAATATTATACATCGAGACCTCAAAACTGCAAATCTTTTGATGGATGAGAAAGGGGTAGTCAAAGTCGCTGATTTTGGTGTAGCCAGATTGCAAAATCAATCTGGTATAATGACTGCAGAAACTGGAACATACCGATGGATGGCTCCAGAGGTTATTCAACATAAGCCATATAACCACAAAGCTGATGTTTTCAGCTTTGGGATTATTCTTTGGGAGCTGCTCACAAGAAAGCTTCCCTATGAAGATCTATCCCCATTGCAAGCAGCAATTGGAGTAGTACATAAGGATTTGAGGCCTGAAATCCCAAGGGATACTCATCCAAAGTTAGTGGAATTGATTCACCGGTGCTGGCATAAAGATCCGTGTTTAAGGCCCGATTTCTCAGAAATTCTCAAGTTTCTGCAGCACATTAACAACATGATAGCAGGCAAGAAGAAGGTTAAGGTTAAGGTTAAGGCTTAG | 1224 | 0.384 | MHEITISTSDKPKLFSQLTTLLSEIGLNIQEAHAFSTLDGYSLDVFVVDGWVGKDTERLKHEVTKKMQKLEEDQRFPLLPFRKETGILKHIPTKKIKKIEQPWCNLPKEKPEKIWMNYISNHVNKPVSRNYVWEIDASCLRYEKKIGSGSVSDLYKGTYINKDVAIKVFKNGSLNENMQREFSQEIFITSKIQHKNVIKFIGACAKPNFHLVTEYMSGGNMYDFLHIQKVILTLPSLLKIAIDVSQGVNYLHKNNIIHRDLKTANLLMDEKGVVKVADFGVARLQNQSGIMTAETGTYRWMAPEVIQHKPYNHKADVFSFGIILWELLTRKLPYEDLSPLQAAIGVVHKDLRPEIPRDTHPKLVELIHRCWHKDPCLRPDFSEILKFLQHINNMIAGKKKVKVKVKA | 407 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g00024 | 407 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 73 | 393 | - | - | |
Trre2g00024 | 407 | ProSiteProfiles | Protein kinase domain profile. | 140 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00024 | 407 | SMART | serkin_6 | 140 | 388 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g00024 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 218 | 407 | - | - | |
Trre2g00024 | 407 | FunFam | Kinase suppressor of Ras 1 | 130 | 216 | - | - | |
Trre2g00024 | 407 | ProSiteProfiles | ACT domain profile. | 3 | 81 | IPR002912 | - | |
Trre2g00024 | 407 | Pfam | Protein tyrosine and serine/threonine kinase | 141 | 388 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g00024 | 407 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 256 | 268 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g00024 | 407 | Coils | Coil | 53 | 73 | - | - | |
Trre2g00024 | 407 | Gene3D | Phosphorylase Kinase; domain 1 | 131 | 217 | - | - | |
Trre2g00024 | 407 | SUPERFAMILY | ACT-like | 2 | 73 | IPR045865 | - | |
Trre2g00024 | 407 | SUPERFAMILY | Protein kinase-like (PK-like) | 115 | 388 | IPR011009 | - | |
Trre2g00024 | 407 | CDD | STKc_MAP3K-like | 146 | 388 | - | - | |
Trre2g00024 | 407 | PRINTS | Tyrosine kinase catalytic domain signature | 213 | 226 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g00024 | 407 | PRINTS | Tyrosine kinase catalytic domain signature | 359 | 381 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g00024 | 407 | PRINTS | Tyrosine kinase catalytic domain signature | 315 | 337 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g00024 | 407 | PRINTS | Tyrosine kinase catalytic domain signature | 250 | 268 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g00024 | 407 | PRINTS | Tyrosine kinase catalytic domain signature | 296 | 306 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g00024 | Trre-Chr2 | 275956 | 281089 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g00024 | 1 | 404 | MAP Kinase Kinase Kinase | AT4G35780 | 54.568 | 4.72e-157 | 453 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Trre2g00024 | PK_Tyr_Ser-Thr | 1.9e-66 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g00024 | - | - | vra:106761427 | 507.679 |