Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g00020 ATGCAGCTAGGTGTGAATTCGGATGATGTGAAGAAGAAAAAAGTTATAGAATCACTTTGTCGGAATCGCTTCGTCTTGCATCTCCAGAATCGCTTCTCGGAATCGCTTTCTCTCAGCACCTTTGATTCGTCCGAATCTCTTCCTCACATCATCTCAGAATCACATCCTAATTCACTCAAAATCGCTTTCTCGCACCAATTGGCTTCATCTGAATCGCTTCCCCAAAACCTAGAGACTATTAAGTTACTTCTCGCGCCTATTTTCTCTAATCTGGTATCGAGGCATAAAAAGGGGGCACAAATATTGTCTGCTTTAAATGTTTTCTTGATTATAGGAATTGGAAATGAAGAGAAGATAAAGGAAAGATCACAACTAGCTTATGAGAGAAAGAAGCTGGTCAATAAATTGAAGGCGAAAGTGGAGAAGATTGTGGACGAGAAGCTTGGTTCCCAATTTGAAGTTGGTGTTTCTTGGAAGACATATTCAATATATCACAATAATGTCACAAAATTAATTAAGAGTCTATTTTGGTGA 534 0.3858 MQLGVNSDDVKKKKVIESLCRNRFVLHLQNRFSESLSLSTFDSSESLPHIISESHPNSLKIAFSHQLASSESLPQNLETIKLLLAPIFSNLVSRHKKGAQILSALNVFLIIGIGNEEKIKERSQLAYERKKLVNKLKAKVEKIVDEKLGSQFEVGVSWKTYSIYHNNVTKLIKSLFW 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g00020 177 Gene3D - 115 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g00020 Trre-Chr2 248274 250808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g00020 116 154 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 61.538 5.77e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g00020 K02872 - cit:102616397 57.7658