Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06404 ATGTCTGGAGTTGAAGAACTCTGGGAGCGGCTAGTTCGGGCTGCTCTGAGAAGGGAGAGAACTGGTGATGATGCATATGGGCGACCTGCTGGTGGAATTGCTGGAAACGTGCCATCTGCGCTCGCTAAAAATAGAGATATTGATGAAATTTTAAGAGTTGCAGATGAAATTCAAGACGATGATCCCACTGTTTCTCGAATATTATGTGAGCATGCCTATTCATTATCTCAAAATTTGGACCCCAATAGTGAAGGCAGAGGTGTTTTACAATTCAAGACCGGTTTGATGTCTGTCATTAAGCAAAAGCTGGCTAAAAGGGAAGTTGGAACCATAGATAGAAGTCAGGACATAGCCCGATTACAAGAGTTCTACAAGAGTTATAGAAAGAAGAATAATGTGGATAAATTACGTGAGGAGGAAATGCAGTTGAGGGAATCTGGTGCTTTCAGCCGGAATCTTGGCGAGTTGGAGCGTAAGACGGTGAAGAGGAAAAGGGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTGCTTGAGCAATTGGCTGAAGAAATTCCTGATGAGCTTAAACGGGTTATGGAATCAGATTCGGCATCAACGGAGGATCTGATTGCGTACAACATCATTCCTATAGATGCTGCTTCTTCAACAAATGCTATTGTTTTTTTCCCTGAGGTGCAAGCGGCAATTTCAGCTTTGAATTATTTCAATGGCTTGCCTGAACTGCCCAGGGCCTACTTCATTTCTCCCGCAAGGAATGCCAGCATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGCGTGAACACATAGTTCATCTGCTAGCAAATGAGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCAAATTGGATGAAGCAGCCTTGCAAAGAGTATTCCACAAGTCCCTCGAGAATTACATAAATTGGTGCAACTACCTATGCATTACGCCTGTTTGGAGCAGTTTGGAGGCTGTTAGTAAAGAGAAGAAGTTGCTGTATGTTTCTTTATACCTACTAATATGGGGTGAAGCCTCAAATGTCAGGTTTCTACCAGAATGCATGTGCTACATATTTCATCATATGGCTAGAGAGATGGATGAGATCTTAAGACAGCAGATTGCACAGACAGCTAATAGTTGCACTTCTGAGAATGGTGTCTCATTTCTTGATCATGTTATTCTTCCTCTCTATGATGTTATTTCTGCAGAAGCTACAAACAATGATAATGGGAAGGCACCTCATTCTTCCTGGAGAAATTACGATGATTTTAATGAGTATTTCTGGTCACTACATTGCTTTGAGCTTAGCTGGCCATGGCGCAAAAGTTCTTCATTTTTCCAAAAGCCGCATCCCCAATCAAAGAAAATGCTATCTGGCAGAAGTCAACGTCAGGGGAAAACATCTTTTGTGGAGCATCGGACTTTTTTTCATCTTTATCATAGTTTCCACCGATTGTGGATATTTCTTTTCATGATGTTCCAGGGTCTAGCAATTATTGCTTTCAATGATGGAAAATTTAATTCCAAGACCTTGCGAGAGGCTCTTAGTCTTGGACCTACATTTGTTGTGATGAAATTTTTTGAGAGTGTCCTGGACATTTTTATGATGTACGGTGCATATACAACTACCAGGCGCTCAGCTCTATCACGAATTTTTCTGAGATTTCTTTGGTTTAGCCTTGCTTCAGTTTTTGTAACTTTCCTTTATGTAAAAGCACTCCAGGAAGAGAGCAAAAGAGATTCAAATTCAGTTATTTTCAGATTTTATGTGCTTGTTGTCGGGATTTATGCCGGTGTCCAGTTTTTCATTAGTTTCTTCATGCGGATTCCTGCATGTCATCTTCTGACGAACCAATGCGATCGTTGGCCTCTCATTCGCTTTGTGAAGTGGCTGCGCCAGGAACGGCATTATGTTGGACGGGGAATGTACGAAAGGAGTTTGGATTTCATAAAGTATATGCTGTTTTGGCTTGTCATTTTGAGCGCAAAATTTTCATTTGCTTACTTTCTTCAGATCAAGCCACTTGTGAAACCAACAAGGGACATAATAAAAGAGAAAAATTTAGTTTACTCCTGGCATGATTTTGTCTCTAAAAATAATCACAATGCTCTGACAATTGTTAGCATATGGTCTCCAGTGGTTTTCATTTATCTTTTGGACATATATGTGTTTTACACACTTGTATCCGCTGTCTGGGGATTCTTGCTTGGGGCAAGAGCTCGTCTGGGAGAGATAAGGTCACTTGAAGCGCTGCAAAAACTTTTTGAGCAGTTTCCTGGAGCTTTCATGGACAATCTTCATGTCGCTCTACCCAACAGGAGTGCCCAACTGTCATCTGTTCAGGTTGTTGAAAAGAACAAGGTTGATGCTGCTCGGTTTTCCCCGTTTTGGAATGAGATTATAAGAAATCTAAGGGAGGAAGACTATATAACCAACTTTGAATTGGAGTTGCTTTTAATGCCTAGAAATTCTGGAGATATTCCTCTGGTTCAGTGGCCACTCTTTCTACTTGCAAGCAAGATATTTTTAGCTAGGGATATTGCTGTGGAACAGAGTAAAGATACTCAAGATGAACTTTGGGATAGGATTTCACGCGATGACTATATGATGTATGCAGTTCAGGAGTGTTACTATGCAATTAAACTCATTTTAACAGAAGTATTAGATGATGCAGGAAGGATGTGGGTTGAAAGGATATATGATGATATTAATGCTAGTATCGCAAAAAGGAGTATTCCTAGGGATTTTCGACTAAATAAGTTGGCTGTTGTGATATCTAGAATAACTGCATTGATGGGGATTCTGAAAGAGACTGAAACACCCGAGCTTGAAAAAGGTGCAGTTAGGGCTGTTCAGGATCTCTATGATGTTGTACGATATGATGTTCTTTCTTTAAATATGAGGGATAATTATGACACATGGAGTTTACTGACCAAAGCTAGAGATGAAGGGCATTTGTTTCAAAAGTTGAAATGGCCAAATGCAGACTTAAGAATGCAAGTCAAAAGATTATATTCATTGCTGACTATCAAAGACTCTGCGTCAAGCGTACCTAGAAATCTTGAGGCTAGGCGAAGGCTGGAGTTTTTTGCAAATTCACTTTTTATGAAGATGCCTCCTGCAAAGCCAGTTCAACAAATGTTATCTTTTAGTGTTTTCACTCCATACTATTCTGAGATTGTGCTTTATAGCATGGCTGAACTCCAAAAGAAAAATGAAGATGGAATTTCAATTTTGTTCTACCTTCAGAAGATATTTCCAGATGAGTGGAAAAACTTTCTTGCCCGAATCGGCCGTGATGAAAATGCAAGTGACACTGATCTTTTTGACAGTCCCAGTGATATTCTTGAACTGCGTTTTTGGGCTTCTTATCGGGGGCAAACATTGGCCAGAACTGTTCGGGGGATGATGTATTATAGGAAGGCTCTCATGCTTCAGACCTATTTGGAAAGGACTACAGCTGGTGGAGATTTGGAGGCTGGACTTGGTTTTGATGAAGTATCTGATACACGTGGCTTTGATTTATCCCCTGAAGCACGTGCTCAGGCGGATCTGAAATTCACTTATGTTGTGACATGCCAAATTTATGGTAAGCAGAAAGAGGAGCAAAAGCCTGAGGCTGTTGATATTGCTTTACTTATGCAAAGAAATGAAGCTCTGCGTGTTGCTTTCATTGATGTTGTTGAAACTTTGAGAGATGGAAAAGTGAACACGGAATACTACTCAAAGCTTGTGAAAGCTGATATTAATGGGAAAGACAAGGAAATATACTCGGTGAAATTACCTGGAAATCCCAAACTTGGTGAAGGGAAGCCCGAGAATCAAAATCATGCAATTATATTTACCCGTGGAAATGCAGTCCAAACGATTGACATGAATCAGGATAACTATTTTGAGGAGGCTTTGAAGATGAGGAATCTGCTTGAGGAATTTCATTCTGATCACGGTCTTCGTGCTCCTACCATACTTGGTGTTAGAGAGCATGTCTTTACTGGAAGTGTGTCATCTTTGGCTTCATTCATGTCCAATCAAGAAACAAGTTTTGTGACTTTGGGTCAGCGGGTTTTAGCAAATCCTTTGAAGGTTCGTATGCATTATGGTCATCCTGATGTTTTTGATAGAGTGTTTCATATAACCCGCGGTGGTATCAGCAAGGCTTCCCGTGTTATCAATATTAGTGAAGATATCTACTCAGGATTCAATTCAACCTTGCGTCAAGGAAACATTACTCATCATGAATATATTCAGGTTGGTAAGGGAAGAGATGTTGGTCTCAATCAGATTGCACTATTTGAGGGGAAAGTTTCAAGTGGAAATGGTGAACAAGTTCTGAGTCGGGATATATACAGACTTGGGCAACTTTTTGATTTCTTCCGGATGATGTCTTTTTACTTCACAACAGTTGGATACTACTTTTGTACCATGTTAACGGTGCTGACAGTTTATGCGTTTCTTTATGGAAAAACATATTTGGCACTCTCCGGTGTTGGTGAAACAATTGAAGAAAGGGCTAAGATAACCAAGAACACTGCTCTGAGTGCTGCTTTGAATACACAGTTTCTCTTCCAAATTGGTATCTTCACTGCTGTGCCAATGGTCTTGGGCTTTATTCTTGAACAAGGCTTCTTGAGGGCCGTTGTCAATTTTATCACGATGCAGTTTCAGCTCTGCACTGTTTTTTTCACTTTTTCTTTGGGTACAAGAACCCATTATTTTGGAAGGACAATTCTTCATGGCGGTGCAAGGTATCAAGCGACTGGCCGAGGGTTTGTCGTCCGCCATATCAAATTTTCCGAAAATTACAGACTCTACTCTCGTAGCCATTTTGTTAAAGGGTTGGAAGTTGTGCTTCTGTTGATAGTATATCTTGCTTATGGTTATAATGATGGTGGTGCACTGTCATACATTCTTTTGAGTATAAGCAGTTGGTTTATGGCTCTATCCTGGTTGTTTGCTCCATATTTATTCAACCCTTCTGGATTTGAGTGGCAAAAGGTAGTGGTAGATTTCCGAGACTGGACAAATTGGCTACTTTACAGAGGTGGAATTGGTGTTAAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGAAGAAGAACTGGGTCATATCAGGAGCTTCGGTTCAAGGATAGCAGAGACCATCCTAAGTCTGAGATTTTTCATTTTTCAATATGGTATTGTGTACAAGCTGGACGTGAAAGGAACTGATACTTCATTGACGGTGTATGGATTCTCATGGGTAGTGCTGGCAGTGCTAATAATTCTTTTTAAGGTATTCACCTTTAGCCAGAAGATATCAGTCAATTTCCAGCTTCTGCTGCGCTTTGTACAAGGAGTATCACTCTTGTTTGCACTGGCTGGTTTGGCTGTAGCAGTTATATTAACCGACCTATCGGTTCCAGACATATTTGCTTCTATTTTAGCATTCATTCCTACTGGGTGGGGAATTTTATCGATTGCTGCTGCTTGGAAGCCTGTGATGAAGTGGTTAGGATTATGGAAGTTCGTTCGATCAATTGCACGTCTATATGATGCTGGCATGGGAATGCTCATCTTTGTGCCCATTGCATTCTTTTCGTGGTTTCCATTTGTATCAACATTCCAAACTCGCCTCATGTTTAACCAGGCTTTTAGCCGAGGGTTAGAAATTTCTTTGATCCTTGCTGGTAACAATCCCAATACTGGGATATAG 5712 0.4062 MSGVEELWERLVRAALRRERTGDDAYGRPAGGIAGNVPSALAKNRDIDEILRVADEIQDDDPTVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDIARLQEFYKSYRKKNNVDKLREEEMQLRESGAFSRNLGELERKTVKRKRVFATLKVLGTVLEQLAEEIPDELKRVMESDSASTEDLIAYNIIPIDAASSTNAIVFFPEVQAAISALNYFNGLPELPRAYFISPARNASMLDFLQYTFGFQKDNVANQREHIVHLLANEQSRLGVPDKTEPKLDEAALQRVFHKSLENYINWCNYLCITPVWSSLEAVSKEKKLLYVSLYLLIWGEASNVRFLPECMCYIFHHMAREMDEILRQQIAQTANSCTSENGVSFLDHVILPLYDVISAEATNNDNGKAPHSSWRNYDDFNEYFWSLHCFELSWPWRKSSSFFQKPHPQSKKMLSGRSQRQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLAIIAFNDGKFNSKTLREALSLGPTFVVMKFFESVLDIFMMYGAYTTTRRSALSRIFLRFLWFSLASVFVTFLYVKALQEESKRDSNSVIFRFYVLVVGIYAGVQFFISFFMRIPACHLLTNQCDRWPLIRFVKWLRQERHYVGRGMYERSLDFIKYMLFWLVILSAKFSFAYFLQIKPLVKPTRDIIKEKNLVYSWHDFVSKNNHNALTIVSIWSPVVFIYLLDIYVFYTLVSAVWGFLLGARARLGEIRSLEALQKLFEQFPGAFMDNLHVALPNRSAQLSSVQVVEKNKVDAARFSPFWNEIIRNLREEDYITNFELELLLMPRNSGDIPLVQWPLFLLASKIFLARDIAVEQSKDTQDELWDRISRDDYMMYAVQECYYAIKLILTEVLDDAGRMWVERIYDDINASIAKRSIPRDFRLNKLAVVISRITALMGILKETETPELEKGAVRAVQDLYDVVRYDVLSLNMRDNYDTWSLLTKARDEGHLFQKLKWPNADLRMQVKRLYSLLTIKDSASSVPRNLEARRRLEFFANSLFMKMPPAKPVQQMLSFSVFTPYYSEIVLYSMAELQKKNEDGISILFYLQKIFPDEWKNFLARIGRDENASDTDLFDSPSDILELRFWASYRGQTLARTVRGMMYYRKALMLQTYLERTTAGGDLEAGLGFDEVSDTRGFDLSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAVDIALLMQRNEALRVAFIDVVETLRDGKVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRAPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVSSGNGEQVLSRDIYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGETIEERAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFILEQGFLRAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNDGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQKVVVDFRDWTNWLLYRGGIGVKGEESWEAWWEEELGHIRSFGSRIAETILSLRFFIFQYGIVYKLDVKGTDTSLTVYGFSWVVLAVLIILFKVFTFSQKISVNFQLLLRFVQGVSLLFALAGLAVAVILTDLSVPDIFASILAFIPTGWGILSIAAAWKPVMKWLGLWKFVRSIARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI 1903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06404 1903 SMART FKS1_dom1_2 336 448 IPR026899 -
Trre1g06404 1903 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 445 IPR026899 -
Trre1g06404 1903 Gene3D - 34 193 IPR023175 -
Trre1g06404 1903 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 153 1896 - -
Trre1g06404 1903 Pfam 1,3-beta-glucan synthase component 1025 1715 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06404 Trre-Chr1 67049033 67082398 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06404 1 1903 Cell Wall Biosynthesis AT3G07160 75.889 0.0 3019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06404 K11000 - gmx:100787540 3423.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g06404 1 67049033 67082398 Trre1g06404 1 67049033 67082398 ECH