Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06391 ATGGCTATATCATCATCATCATTGCCAACCAATATTAATAGCTTGTTCTCAGTCTCAGCACGGCCACAGCTTTTGGTTACTTCTTCTCTTCCTTTCATTTCCACAACTACCATCCATTTCCATAATTATTCACTTCATAACAAGCTTCACCTTCGGCGACGACTTAATTCTGTTAGAAAATTGAGTGGAGTTCCCGTGCCAACGATAGCCATGGCAACCGAGGTGCAAGAAGTTCTACCACCACCTCTTACTTCAACTTCACCCCCACCTTCCTTATTTGATGGAACTACCAGGTTGTATATCTCCTACAAATGCCCCTATGCTCAGCGTGTATGGATCGCCCGTAACTCTAAGGGATTGCAGGACAAGATAGAGTTGGTTCCAATTGATTTACAAGACAGGCCTTCCTGGTATAAGGACAAAGTCTACCCAGCCAACAAGGTTCCATCTCTAGAACACAATAATGAAGTTAGAGGAGAGAGTCTTGATCTGATTAAATATATTGACACTCACTTTGAAGGCCCCTCCCTTTTCCCTACTGAACCTGATGATAAGGAATTTGCTGAAGAGTTGCTATCTTACACAGATACATTCTACAAGGCCGCAGTTTCTTCGTTTAAAGGAGGAGATGTAACTGAGGCTGGGACTGCATTTGATTATCTTGAGACTGTTCTCTCCAAATATGATAATGGACCTTTCTTCCTTGGCCAATTCAGTCTGGTGGATATAGCATATGCGCCTTTCATAGAAAGATTTCAACCATTTTTAAAGGATGTGAAAAATTATGACATTACAATAGGCAGGCCTAAACTGGCAGCATGGATTGAGGGAATAAACAACATCGAAGGCTACAAAATAACCCGTTCTGATCCCAAGGAGCTTGTTGAAAGTTACAAGAAGCGCTTCCTGGTATCATAA 918 0.4183 MAISSSSLPTNINSLFSVSARPQLLVTSSLPFISTTTIHFHNYSLHNKLHLRRRLNSVRKLSGVPVPTIAMATEVQEVLPPPLTSTSPPPSLFDGTTRLYISYKCPYAQRVWIARNSKGLQDKIELVPIDLQDRPSWYKDKVYPANKVPSLEHNNEVRGESLDLIKYIDTHFEGPSLFPTEPDDKEFAEELLSYTDTFYKAAVSSFKGGDVTEAGTAFDYLETVLSKYDNGPFFLGQFSLVDIAYAPFIERFQPFLKDVKNYDITIGRPKLAAWIEGINNIEGYKITRSDPKELVESYKKRFLVS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06391 305 PANTHER GLUTATHIONE S-TRANSFERASE L1 73 302 IPR044629 GO:0004364
Trre1g06391 305 Gene3D - 174 305 - -
Trre1g06391 305 FunFam Glutathione S-transferase L2, chloroplastic 70 173 - -
Trre1g06391 305 SFLD Glutathione Transferase (cytosolic) 98 278 IPR040079 -
Trre1g06391 305 Pfam Glutathione S-transferase, N-terminal domain 99 175 IPR004045 -
Trre1g06391 305 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 154 302 IPR010987 -
Trre1g06391 305 SFLD Main (cytGST) 98 278 - -
Trre1g06391 305 SUPERFAMILY GST C-terminal domain-like 172 302 IPR036282 -
Trre1g06391 305 Gene3D Glutaredoxin 70 173 - -
Trre1g06391 305 CDD GST_C_Lambda 181 299 - -
Trre1g06391 305 FunFam Lambda class glutathione S-transferase 174 305 - -
Trre1g06391 305 Pfam Glutathione S-transferase, C-terminal domain 211 276 - -
Trre1g06391 305 SUPERFAMILY Thioredoxin-like 89 177 IPR036249 -
Trre1g06391 305 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 95 176 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06391 Trre-Chr1 66952186 66954410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06391 81 301 Glutathione S-transferase Gene Family AT3G55040 67.421 1.28e-108 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06391 K00799 - aew:130775349 366.696