Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06313 ATGTCTCTCGAAATTGCTGTCAAGGCTGCCGTTGGCGCTCCGAATGTTCTCGGAGACTGTCCATTTTCGCAAAGGGCACTCTTAACTTTGGAAGAGAAGAAGGTCCCATACAACATCCACCTTATTGATATCAGTAACAAACCCCAATGGTTTTTGGAAGTGAATCCAGAAGGAAAGGTTCCAGTGGTTAAGTTTGATGATAAATGGGTTCCTGATTCTGATGTTATTGTTGGAATACTTGAAGAGAAATACCCTGAACCCTCTCTCGTTACTCCTACTGAATTTGCATCAGTGGGATCAAACATCTTTGGGTCTTTCGTGAGCTTTCTGAAGAGCAAGGATTCAAATGATGGAACAGAGCAAGCATTGGTTGCTGAACTGAATGCTTTGGATGAACATCTTAAGGCTCATGGTCCATTTATTGCTGGGGAAAAGGTTTCTGCTGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTAGTGGTAGCACTTGATCACTTCAAGAATTGGACCATTCCTGAGAGTTTGACAAATGTCCACAACTACATCAAGTTGCTCTTCGCCCGTGATTCATTTGAGAAAACCAAGGCTGCAAAGGAATATGTCATTGCTGGATGGGCACCAAAGGTCAATGCATGA 639 0.4288 MSLEIAVKAAVGAPNVLGDCPFSQRALLTLEEKKVPYNIHLIDISNKPQWFLEVNPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLVTPTEFASVGSNIFGSFVSFLKSKDSNDGTEQALVAELNALDEHLKAHGPFIAGEKVSAVDLSLAPKLYHLVVALDHFKNWTIPESLTNVHNYIKLLFARDSFEKTKAAKEYVIAGWAPKVNA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06313 212 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Trre1g06313 212 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Trre1g06313 212 Gene3D Glutaredoxin 1 89 - -
Trre1g06313 212 Gene3D - 90 212 - -
Trre1g06313 212 SFLD Glutathione Transferase (cytosolic) 19 186 IPR040079 -
Trre1g06313 212 CDD GST_N_family 20 77 - -
Trre1g06313 212 CDD GST_C_DHAR 89 209 - -
Trre1g06313 212 Coils Coil 210 212 - -
Trre1g06313 212 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Trre1g06313 212 SUPERFAMILY GST C-terminal domain-like 83 210 IPR036282 -
Trre1g06313 212 SFLD Main (cytGST) 19 186 - -
Trre1g06313 212 Pfam Glutathione S-transferase, C-terminal domain 118 184 - -
Trre1g06313 212 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 209 IPR044627 GO:0033355|GO:0045174|GO:0098869
Trre1g06313 212 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 212 - -
Trre1g06313 212 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06313 Trre-Chr1 66485917 66489045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06313 1 212 Glutathione S-transferase Gene Family AT1G75270 75.117 5.84e-119 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06313 K21888 - gmx:100306061 374.4