Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06311 ATGCTTTTAAACAATCACATTCCCGTGGAAAGATCTAAACAAGCGATTTACAAAAAATACCGCGATCTCAAAAAGAATCAAAAACCCTTGCGGAATTTTATCAACAAACTGGATAAGGAGAAACTTGATTTGCAGAAGGAAAAAGTGGATTTGGAGGCTGTTTTAAAGAAAGAAAAGGAGGAGAACGAGGTTCTTCTCAAAGATATGAAGATTGTCAAAGACATGAATAATAAACTTGAAGAGCAATTCAATGAAGACCATCAACGCTGCTTTGCAGTCATTTCTAAAGAAAACTTGATACGGAGGAACCTAGGTTTAGTTTTTTGGAATGTCAGTGCTATTCTTGATATGGAGGAACCTAGGTGGGAGGCACATCAAATTCCTAAAGTGAAGGTATCCAAACTTGATAGAAGTAAACTTAGTAAGCACAAGTCAGCATCAGATCAGACAGTAAATTCCCGAATTTCTAATACTAATGGTGCCAGTTATGAGAAAATGTCATCTCAACAAGCTTTCAACAGGACCCTTCCATCATCTTTTCAATCATCTGCAACAAGGTCTCTTCCACCTTCGTCATTTCCACCTAATAACAGATTAAGTTATTTAAGCAGCAGCCAACTTAATGATCCATACCGGAGTCGCCACCATGGCGTAGAACCTAGCACATGCAGATATAACTCCACACCATTTGCTAGTTCTAGTGAATCTGCATACCATGCTGGAGCAGGTGATGAAAAGGCTCCTACAACTGATGAGAGACTAATTTATGAAGCAGCATTACAGGAACAAAGTCCTTATATGCCCCAGAATCCTGATATTGCCAAAATTTTCAGCATTACGAGCGAATCTGTCATATGTCTTGAAGGTTCAAGTGCCATGCATTCTGGTAATCTGCAATCTCTTCTTTCGTCAGAGCTACTTGGCAATAATTTTGAAGTTATGAACAAAGATGTGCTACTCTTTAATACTGACTGA 975 0.3856 MLLNNHIPVERSKQAIYKKYRDLKKNQKPLRNFINKLDKEKLDLQKEKVDLEAVLKKEKEENEVLLKDMKIVKDMNNKLEEQFNEDHQRCFAVISKENLIRRNLGLVFWNVSAILDMEEPRWEAHQIPKVKVSKLDRSKLSKHKSASDQTVNSRISNTNGASYEKMSSQQAFNRTLPSSFQSSATRSLPPSSFPPNNRLSYLSSSQLNDPYRSRHHGVEPSTCRYNSTPFASSSESAYHAGAGDEKAPTTDERLIYEAALQEQSPYMPQNPDIAKIFSITSESVICLEGSSAMHSGNLQSLLSSELLGNNFEVMNKDVLLFNTD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06311 324 MobiDBLite consensus disorder prediction 145 211 - -
Trre1g06311 324 MobiDBLite consensus disorder prediction 135 226 - -
Trre1g06311 324 Coils Coil 34 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06311 Trre-Chr1 66480981 66485160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06311 135 262 RAD5 or RAD16-like Gene Family AT1G50410 32.374 3.79e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06311 - - gmx:100811598 125.176