Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06259 ATGGAGAGGCAGAACAACCAAACTCACAATAACAAAAGGGCAAGATGTGAACTACCAACTAGACAACATGATTCCCTTGACAGGGAATATTTCAATAGTTACAATGATGTTACCCTTCACCAAAATTTGATCAAGGATAACGTGTGGACTAAGGCCTATAAAACTGCTATTGAACATCATCAGCAACAAATTGCTGGAAAGATTGTTTTAGATGTTGGATGTGGAACAGGTCTATTATCTATATTATGTGCTCAAGCTGGAGCAAGGAAGGTATATGCCATTGATGCGAGTGACATTGCTAAGCAGGCCGAAAATGTTGTTACTGCAAATAATCTTTCTGACATCATCACTGTATTGCATGGACGAATTGAGGATATTCAACTCAATGAAAAGGTGGATGTAATAATTTCTAACTGGATGGGCTACATGCTTCTCCATGAGGGCATGCTTGCAAGTGTCATCTTCGCCAGAGATCGTTGGCTCAAACCCGGAGGTTTAATGCTTCCTTCTCATGCAACGTTATATCTAGCTCCTGTCACAACTAACAAACATCGTGACTGCATAGACTCCTGGCGCAATGTTGAAGGAATTGATATGTCAGCCATAATTCCAATGGCGAGAACCCATGCTTTTCAAGAACCTATTATGGAGACACTTTCAAGTAAAAATGTTCTAGCTGAGCCTTGTATGGTGAAATACATCAATACATCTTCAATCACCATGCGTGAACTAGAAACAATTGCAACTGTGTTTCAGTTCATTGCAATGAAGAGTGCATCACTGAGTGGCTTTGCAATATGGTTCGATGTGGAATTCGTTGGGAATCTATTATCACCTTTTCCCATTCGCTGTCGGTTTCCGCTTTCAAGTGCTGACGGTGTTCCTGCATTTGGTAATCAGAGACAACGGACAACAAACCTTAATGAAGCACTCGTCATGTCCACTGGGCCTGAAGATCCACCTACCCACTGGAAACAGACATTGATATACTGTTGGAATCCAAGAGAAATTGAAAAGGGTCAAGTGATTAAAGTAAATTTGAGTTTATCAAAGAGTTACTGGTCACCTCGCGCTATATGTATTAACGTTGAATATACTTTGGACGGTCAAGACTACTTTGTCTATGACACGGTTATGAAATGA 1143 0.4051 MERQNNQTHNNKRARCELPTRQHDSLDREYFNSYNDVTLHQNLIKDNVWTKAYKTAIEHHQQQIAGKIVLDVGCGTGLLSILCAQAGARKVYAIDASDIAKQAENVVTANNLSDIITVLHGRIEDIQLNEKVDVIISNWMGYMLLHEGMLASVIFARDRWLKPGGLMLPSHATLYLAPVTTNKHRDCIDSWRNVEGIDMSAIIPMARTHAFQEPIMETLSSKNVLAEPCMVKYINTSSITMRELETIATVFQFIAMKSASLSGFAIWFDVEFVGNLLSPFPIRCRFPLSSADGVPAFGNQRQRTTNLNEALVMSTGPEDPPTHWKQTLIYCWNPREIEKGQVIKVNLSLSKSYWSPRAICINVEYTLDGQDYFVYDTVMK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06259 380 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 27 364 IPR025799 GO:0016274|GO:0018216
Trre1g06259 380 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 17 368 IPR025799 GO:0016274|GO:0018216
Trre1g06259 380 FunFam Protein arginine N-methyltransferase 6 23 169 - -
Trre1g06259 380 Pfam Ribosomal protein L11 methyltransferase (PrmA) 63 145 - -
Trre1g06259 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 33 369 IPR029063 -
Trre1g06259 380 CDD AdoMet_MTases 69 168 - -
Trre1g06259 380 Gene3D Vaccinia Virus protein VP39 24 169 IPR029063 -
Trre1g06259 380 Gene3D - 171 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06259 Trre-Chr1 66102611 66108156 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06259 5 346 C2H2 Transcription Factor Family AT3G12270 30.252 1.29e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06259 K11437 - gmx:100809174 401.364