Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06258 ATGGTAGATGTGAAACTACTAGGATTTTGGTCTAGCCCTTTTGTTCATAGAGTGATATGGGCTCTAAAATTCAAAGGCATAACCTATGATTACATAGAACAAGATAGACATATCAAAAGTGAATTACTCCTTCAATCTAATCCTGTTTACAAGAAAGTCCCTGTTCTTATTCACCAAGGTAAAGCCATTGCTGAATCTCTTGTTATTCTTGAATACATTGAAGAAACTTGGCCAGAGAATCCATTGCTGCCACAAGATTGCTATGAGAGAGCCTTAGCTCGATTTTGGATTAAATTTGGAGAAGATTCGATTGCTTCTATAACTGATTTGTTTCTCCGACCCCCTAAAGACGAAAAAGAAAGAGCTAATGCAATAGAAAAAGCACAAGAAACTATCACAATAATGGAAGAGCAAGGGCTAGGGGACAAGAAGTTTTTTGGAGGCAACAATATTGGAATGGTTGACATAACATATGGATGCCTTAGTCATTGGTTAGAAGGTTTGGAGGAAATTGTTGGGATCAAATTGATTGAGGCAAATAAATTTCCTCGATTGCATGCATGGATTCAAAACTTTAAGCAAGTTCCTTTGATTAAAGAAAACATTCCTGATTATGGGAAACTATTGACCCATCTTCAATGGCGCAGGCAGGAATATATTGTCTAG 666 0.3694 MVDVKLLGFWSSPFVHRVIWALKFKGITYDYIEQDRHIKSELLLQSNPVYKKVPVLIHQGKAIAESLVILEYIEETWPENPLLPQDCYERALARFWIKFGEDSIASITDLFLRPPKDEKERANAIEKAQETITIMEEQGLGDKKFFGGNNIGMVDITYGCLSHWLEGLEEIVGIKLIEANKFPRLHAWIQNFKQVPLIKENIPDYGKLLTHLQWRRQEYIV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06258 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 204 IPR045073 -
Trre1g06258 221 SFLD Main.3: Omega- and Tau-like 3 219 IPR045073 -
Trre1g06258 221 FunFam Putative glutathione S-transferase 1 83 - -
Trre1g06258 221 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Trre1g06258 221 CDD GST_N_Tau 4 77 - -
Trre1g06258 221 Pfam Glutathione S-transferase, C-terminal domain 110 193 IPR004046 -
Trre1g06258 221 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Trre1g06258 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Trre1g06258 221 Gene3D - 83 220 - -
Trre1g06258 221 Gene3D Glutaredoxin 2 82 - -
Trre1g06258 221 CDD GST_C_Tau 88 215 IPR045074 GO:0004364|GO:0006749
Trre1g06258 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 220 IPR010987 -
Trre1g06258 221 SFLD Glutathione Transferase (cytosolic) 3 219 IPR040079 -
Trre1g06258 221 FunFam Tau class glutathione S-transferase 83 221 - -
Trre1g06258 221 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06258 Trre-Chr1 66098679 66099998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06258 3 218 Glutathione S-transferase Gene Family AT2G29420 45.833 4.53e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06258 K00799 - gmx:547586 380.563