LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre1g06258	ATGGTAGATGTGAAACTACTAGGATTTTGGTCTAGCCCTTTTGTTCATAGAGTGATATGGGCTCTAAAATTCAAAGGCATAACCTATGATTACATAGAACAAGATAGACATATCAAAAGTGAATTACTCCTTCAATCTAATCCTGTTTACAAGAAAGTCCCTGTTCTTATTCACCAAGGTAAAGCCATTGCTGAATCTCTTGTTATTCTTGAATACATTGAAGAAACTTGGCCAGAGAATCCATTGCTGCCACAAGATTGCTATGAGAGAGCCTTAGCTCGATTTTGGATTAAATTTGGAGAAGATTCGATTGCTTCTATAACTGATTTGTTTCTCCGACCCCCTAAAGACGAAAAAGAAAGAGCTAATGCAATAGAAAAAGCACAAGAAACTATCACAATAATGGAAGAGCAAGGGCTAGGGGACAAGAAGTTTTTTGGAGGCAACAATATTGGAATGGTTGACATAACATATGGATGCCTTAGTCATTGGTTAGAAGGTTTGGAGGAAATTGTTGGGATCAAATTGATTGAGGCAAATAAATTTCCTCGATTGCATGCATGGATTCAAAACTTTAAGCAAGTTCCTTTGATTAAAGAAAACATTCCTGATTATGGGAAACTATTGACCCATCTTCAATGGCGCAGGCAGGAATATATTGTCTAG	666	0.3694	MVDVKLLGFWSSPFVHRVIWALKFKGITYDYIEQDRHIKSELLLQSNPVYKKVPVLIHQGKAIAESLVILEYIEETWPENPLLPQDCYERALARFWIKFGEDSIASITDLFLRPPKDEKERANAIEKAQETITIMEEQGLGDKKFFGGNNIGMVDITYGCLSHWLEGLEEIVGIKLIEANKFPRLHAWIQNFKQVPLIKENIPDYGKLLTHLQWRRQEYIV	221

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre1g06258	221	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	6	204	IPR045073	-
	Trre1g06258	221	SFLD	Main.3: Omega- and Tau-like	3	219	IPR045073	-
	Trre1g06258	221	FunFam	Putative glutathione S-transferase	1	83	-	-
	Trre1g06258	221	SUPERFAMILY	GST C-terminal domain-like	75	218	IPR036282	-
	Trre1g06258	221	CDD	GST_N_Tau	4	77	-	-
	Trre1g06258	221	Pfam	Glutathione S-transferase, C-terminal domain	110	193	IPR004046	-
	Trre1g06258	221	SUPERFAMILY	Thioredoxin-like	3	102	IPR036249	-
	Trre1g06258	221	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	2	81	IPR004045	-
	Trre1g06258	221	Gene3D	-	83	220	-	-
	Trre1g06258	221	Gene3D	Glutaredoxin	2	82	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre1g06258	Trre-Chr1	66098679	66099998	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre1g06258	3	218	Glutathione S-transferase Gene Family	AT2G29420	45.833	4.53e-63	194

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre1g06258	K00799		-	gmx:547586	380.563

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