Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06256 ATGAGTTCGCTTGATATTGAAATTCATTACTGGGAAACATTTTGTAAGGGTGCTGAAGCAATGAAAAAATTTGCTGAATCCAAAAAGAATGCTGAGAAGGGTGACTCTTCTAGCAAGCAAGCTGAAAAGGGTGCCTCTTCTAGCAAGCAAGCTGAAAAAGGTGCATCTTCTAGCAACATTGCTGAAAATATAATTATCCCACCTTGGGTCAAGTGGGACAGGGATACGGCTTGGATGGAGGCGTATCGATCAGCAATACTTTTCCATCGGAAGCTTATCGAAGGAAAAGTTATTGTCAATGTAGGTTGTGGCACTGAGATTTTATCTATTTTCTGTGCAAAGGCTGGAGCTAGGAATGTTTACGCCATTGAGGCATCTGGGATGGCGACAGAGGCCGAAAGGATTGTAGAAGCTAACGGGTTGTCTGCACAGTACAGCTTGGGGAATGGTCGAAGTCGATCCCCTAGAACCCCAACTCAAGAAGCACTACCTTTTGCTGCTTTCACTTCATTGCTAGTGGAGATGGTTGCAAAACTAGAGCATGTTATGGGAAGACTAAGGCGTGCATTGCACATGGGTAGTAATTTTTGCACAATTGGTCCTGAACTTTGA 612 0.4379 MSSLDIEIHYWETFCKGAEAMKKFAESKKNAEKGDSSSKQAEKGASSSKQAEKGASSSNIAENIIIPPWVKWDRDTAWMEAYRSAILFHRKLIEGKVIVNVGCGTEILSIFCAKAGARNVYAIEASGMATEAERIVEANGLSAQYSLGNGRSRSPRTPTQEALPFAAFTSLLVEMVAKLEHVMGRLRRALHMGSNFCTIGPEL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06256 203 MobiDBLite consensus disorder prediction 40 55 - -
Trre1g06256 203 MobiDBLite consensus disorder prediction 26 55 - -
Trre1g06256 203 Pfam Ribosomal protein L11 methyltransferase (PrmA) 94 145 - -
Trre1g06256 203 Gene3D Vaccinia Virus protein VP39 57 193 IPR029063 -
Trre1g06256 203 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 48 153 IPR025799 GO:0016274|GO:0018216
Trre1g06256 203 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 155 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06256 Trre-Chr1 66085688 66088965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06256 75 139 C2H2 Transcription Factor Family AT3G12270 51.515 7.54e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06256 K11437 - osa:9268644 93.9745