Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06246 ATGTCGGAAGCACCGTCTCAACCACCACCACCACCACCCGCAACTGAAACCCCTCCTCCATACTGGTGCTACCACTGCGACAAACGCGTCTCCGTCGAAACGGTCGCAAATCTCCCCGACCTAATCTGCGGCGATTGCAAAAACGGTTTCGTCGAATCCATCACCACACCTTCTCGTTCTCGTTCACCTTCCTCTTCCTCCGATGATCCTTACTTTGGTTCTCAATTTCTTCAGGTTCTTCGCCTAATCGCTCAATCGTCGCGTGAAGACGACGCGTCTCCTCCACCTCCTCCAAGTCGTTCACCGGAGAACGATTTCCTCAGGATCGAACTCGGTGGCTGGGACCACAACGACGAAGATAACGATGATGATGAATTTCATAACGACGGTGAAGATACCGAAGGTACCGTCGAGGAACAGGAAGATCGATCCGGAAACGAGGATCCGCATGGGAACGATGAAGATATGAGACGAAGGAGACGCGATCTGTTGCGTCATCGAATTAGGGATTTAGCGACCCGAACCCGAAGCATGCAGAACCGGATCTTGGATTGGGCGGAGATTCTAATGGGACTGGAAGATAATTCAATTGAGCTTCGTCTTCAGATGCCGGAATCAGACCGGTATGTCGGCAATCCGGAGGATTATGTTGATGCGGCGGAGTATGAGGCATTGCTGCAGACGCTGGCGGAGAGTGATGGAAGTGGAAGGAGAGGAGCTCCGCCGGCTTCAAAGTCAGCGGTGGAAGCATTGCCGACGGTGAAGATTGAGTCGGAGACTGAGGTGGTTGCTTGTGCTGTATGTTTGAGCTTCCAACTGATGATAAGGAGTATGAAGAAGAGAGAGCTTCAGGTTCGGGTCGTGGTGGTGGTGGTGGTGGTGGCAGCGGTGGAGGTTCCACCGTTTGATGTAATTTCATCAAAGCTTGCTCAATCAATGTTGTTTATTTGA 951 0.5184 MSEAPSQPPPPPPATETPPPYWCYHCDKRVSVETVANLPDLICGDCKNGFVESITTPSRSRSPSSSSDDPYFGSQFLQVLRLIAQSSREDDASPPPPPSRSPENDFLRIELGGWDHNDEDNDDDEFHNDGEDTEGTVEEQEDRSGNEDPHGNDEDMRRRRRDLLRHRIRDLATRTRSMQNRILDWAEILMGLEDNSIELRLQMPESDRYVGNPEDYVDAAEYEALLQTLAESDGSGRRGAPPASKSAVEALPTVKIESETEVVACAVCLSFQLMIRSMKKRELQVRVVVVVVVVAAVEVPPFDVISSKLAQSMLFI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06246 316 MobiDBLite consensus disorder prediction 1 20 - -
Trre1g06246 316 MobiDBLite consensus disorder prediction 87 106 - -
Trre1g06246 316 MobiDBLite consensus disorder prediction 116 138 - -
Trre1g06246 316 MobiDBLite consensus disorder prediction 139 159 - -
Trre1g06246 316 MobiDBLite consensus disorder prediction 112 159 - -
Trre1g06246 316 Pfam zinc-ribbon 21 54 IPR039525 GO:0061630
Trre1g06246 316 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06246 Trre-Chr1 66029785 66030952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06246 176 268 C3H Transcription Factor Family AT5G01980 40.000 6.37e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06246 - - gmx:100802200 379.793