Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06220 ATGAAGTTAATGCACTGCCATGAACTGTGCAAGCCAGTTACTATCTTGATTGTAGTTAACTTAGCTCTTGCTTTTGTCAATTTACTTCTTAAAATGGTTCTAAACGAAGGAATGGACTACATGTCCATTGTAACATACCGACAAGCTATTTCATTTATCTTCATGGCACCTATTGCATGGTTCTATGAAAGGAAACACAAATTGGAGGCTCACATAATATGTCTCCTTTTTCTGTCGGCTCTTGTCGGAGTAACAATCCCCCAATACTTGTTTCTTCTTGGACTTCAGTATACCTCTGCCACATTCTCATGTGCATTCCTCAACATGGTGCCTGTATTTACATTCGTCATGTCACTTCCATTTGGGATAGAGAAGGTGAACATGAAATGCAAGAGTGGTAAAGCCAAAATCTTGGGAACTATTGTGTGCATTGGTGGAGTTTTGTTATTAGCCCTTTATAAAGGAATTTCCTTTAACAGCCCACAATCTGAACACATAGCCAATTCATATACAAGTGCACCTCCTAAGTTAGAGAAATGGATTATAGGCTCAATACTTTTGACTGCAGGGTGCATTATGTGGTCTTCTTGGTTTGTTATACAAGCTAAGATTAGCAAAAAGTATCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCTATTCAATCAGCAATATTAACTTTGGTCATCAAGGGAAACAATGCCTCGTGGATCCTCAAAGGAAAGATGGAAATATTGTGTGTAGTATATGCTGGATTGGTGGGGTCAGGCCTGTGTTATGTGGCAATGTCATGGTGTGTCAAACAAAGAGGTCCAGTTTTTACTGCAGCATTTACCCCTCTTTTACAAATATTTGTGGCTGTGCTTGATTTCACTATACTGAAGGAGGAAATATACTTAGGAAGTATTGCAGGCTCTGTGTTGGTTATTGTTGGCATGTACATTCTTTTATTGGGAAAAAGTATGGAAGGAGAGCAATGTGTCATGAAGGATACACAAGCAAATCAAGATGTAGAATGTCAATGA 1035 0.3865 MKLMHCHELCKPVTILIVVNLALAFVNLLLKMVLNEGMDYMSIVTYRQAISFIFMAPIAWFYERKHKLEAHIICLLFLSALVGVTIPQYLFLLGLQYTSATFSCAFLNMVPVFTFVMSLPFGIEKVNMKCKSGKAKILGTIVCIGGVLLLALYKGISFNSPQSEHIANSYTSAPPKLEKWIIGSILLTAGCIMWSSWFVIQAKISKKYPCQYSSTAILSLFAAIQSAILTLVIKGNNASWILKGKMEILCVVYAGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLLQIFVAVLDFTILKEEIYLGSIAGSVLVIVGMYILLLGKSMEGEQCVMKDTQANQDVECQ 344
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06220 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Trre1g06220 344 Pfam EamA-like transporter family 15 151 IPR000620 GO:0016020
Trre1g06220 344 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Trre1g06220 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 324 - -
Trre1g06220 344 PANTHER WAT1-RELATED PROTEIN 12 327 IPR030184 GO:0016020|GO:0022857
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre1g06220 Trre-Chr1 65859256 65861031 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06220 8 254 Nodulin-like Gene Family AT3G30340 45.020 7.95e-76 233