Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06131 ATGGAGCTTTCTGCATTCCCTATTTTCAAACCACTTTCCAATTCCCTTCCTTATCAATTTCCCTCTCGATGCTCTCTTTCTCTTCGTCACTGTGATTATGGCTTTCGTCGGAATCGCAATTCAAAACCGTTTCTACAAATCAGAATGTGCTCGGAGAAAGTTCCGTCCAACTGTTACGTCGATGTCATTGCCATTGGCGGTAGGAAGGATGCGGTTCTTGATTTCTGCTTAAACTCGCCGTTTCAGTTGTCTTCTCTGCGCTTTTGGAATGTCATTGTGAAAGATTCGCAAGAGGTGCAATTACAGCAAAGGTCTACTAAAGAAGAACCTCACCCAGGAATTGTCGAACCTCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGACCAGACCACACTGTCGCTGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGACTCACAATTGCTGTAGTTTTGAAGCCTTTTAGCTTTGAAGGGATAAGACGAAAAGATGAGGTAAAAGCTTTGATGGGGAAGCTTAAGGAGAATACTAATTTACTTATCGAAATTGATATTGACGCACTTCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAAATCCGAAATGCACAAAAAATTTATAGATACATTGCACAGTAGCATGAAAGAAACATGCAATTCAGAAATTATTAAAATATTGGAGTGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATTTTGCAGTCTATATTTGATTGTCCTTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGTGTAGTTATATGCATTGTTGCGTGTTCTGAACCCATCAATGATAGCGATGTAGCAGTATTTTTGCGTACTTTCCGTCAAACAACCGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTAGAGCCCAACCTACTGATCACGACTGTCCTTACACTTGGCAGCTTAACCGTGCAACAACCTTCCCAGAATGGTGGTATATTATCCAAACTTGCCCTGCATTTTCCTCGTGTTTTTAGCTTTTGGGGAAGACATAGTCAGCAACAAATTGTCTCTGGGAAAGAGGATGCAGTATCTTCTAATGAAATGATAAGATCTTATAACAGTGATGATGTTGAAAATAGGATTGCTCCCAGTATTGTTGATGAAAGATTTGACGAGCACTATACAGAATTGGAGCCAGACGTGAGCAACAACACCTCAAAGTTGTCTGCTTCAAGGGATTCTGAAAAAAATGAAGATTTATTTGACACCATAGCCAATTGTCCTATCCCTTATGAGTCCATTATTGAAGAAGGCGACTCTGCTTTTCAGAGGGAGCAGCTTGGAAAATGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGGCCCAAGAAAGGGAAGCTGATGCTACACCAATGGTTGATAACCTAAGCATATTCCACCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACAGTTTAGAAATCACATTTAGGTCAAAAAAGCATGAGCCGGATGCAGGTATGGAAGCAGTGATGGAATTTACATCTTCACTTTTAAAGGCAAAACATGCTAATAGTAATAAACCAAAGAAGCACGGTGTTCTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAACAAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGACGGTGCCAAGGTGGTCTTCCTGAAGGAAAGGGGCGTCTTGTTCTTCAAGATGGAAATATCTACGACGGATTATGGCACAGTGGCAAGAAATCGGGTCCAGGAACATTCTATTTCAAGAATGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCAAACTGGCGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAATCTGGTGATGCCTTCTTTGGCAATTTCAAAGACGGATGGCGGCATGGGCAGTTTTTTTGTGTGAATGCAAATGGAACGAGGTACACTGAAACTTGGGATCACGGTGTTCTTTTAGACAGCAAGCCTTTAGATAGATGA 2202 0.4146 MELSAFPIFKPLSNSLPYQFPSRCSLSLRHCDYGFRRNRNSKPFLQIRMCSEKVPSNCYVDVIAIGGRKDAVLDFCLNSPFQLSSLRFWNVIVKDSQEVQLQQRSTKEEPHPGIVEPPVFMKSCSKTIVLVASAGYGPDHTVAVDIFETVRSTNGLTIAVVLKPFSFEGIRRKDEVKALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEMHKKFIDTLHSSMKETCNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDCPFLGVSLKDPNSVVICIVACSEPINDSDVAVFLRTFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLGSLTVQQPSQNGGILSKLALHFPRVFSFWGRHSQQQIVSGKEDAVSSNEMIRSYNSDDVENRIAPSIVDERFDEHYTELEPDVSNNTSKLSASRDSEKNEDLFDTIANCPIPYESIIEEGDSAFQREQLGKWNLGPGFEVAKEWAQEREADATPMVDNLSIFHLPVGVRPSEELKDSLEITFRSKKHEPDAGMEAVMEFTSSLLKAKHANSNKPKKHGVLSVRAASMLEAERDLSTKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLQDGNIYDGLWHSGKKSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFQTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFFCVNANGTRYTETWDHGVLLDSKPLDR 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06131 733 Gene3D Tubulin/FtsZ, GTPase domain 105 350 IPR036525 -
Trre1g06131 733 Gene3D - 653 730 - -
Trre1g06131 733 Gene3D - 599 652 - -
Trre1g06131 733 MobiDBLite consensus disorder prediction 427 446 - -
Trre1g06131 733 Pfam MORN repeat 647 669 IPR003409 -
Trre1g06131 733 Pfam MORN repeat 694 705 IPR003409 -
Trre1g06131 733 Pfam MORN repeat 624 646 IPR003409 -
Trre1g06131 733 Pfam MORN repeat 606 622 IPR003409 -
Trre1g06131 733 SUPERFAMILY Tubulin nucleotide-binding domain-like 62 226 IPR036525 -
Trre1g06131 733 SMART morn 599 620 IPR003409 -
Trre1g06131 733 SMART morn 691 712 IPR003409 -
Trre1g06131 733 SMART morn 645 666 IPR003409 -
Trre1g06131 733 SMART morn 622 643 IPR003409 -
Trre1g06131 733 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 84 723 - -
Trre1g06131 733 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 598 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06131 Trre-Chr1 65274403 65281992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06131 39 732 PP2C-type Phosphatase Gene Family AT1G75010 47.017 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06131 - - gsj:114371951 1047.73