Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06077 ATGTCACAAGATTACGTTGAGAATGAGAAGGATTTTGCTCCTCCACCGCCAAAGGAATTGGAAGTTGAAGAAAACGAAGACCACTTGTACATTCCAATAGCACAAGATTACGTTGAGAATGAGAAGGAATTGGAAGGTGAAGAAGACAACAGTTCCGTTCCAATTTCACAAGATTCTGATAGAGAAGCCATAGAAGCTTTCAATCGCTGGCGCCAATTGTTTGAAGTAAATTACACTCTCACAACTGAGGAAGAGAGGAGGTTCAAATATTTCAAGAATTATTTTAATAGGAAAGTCAATCCCACAATGGAAATTTTTGGTATAAATCTTCCGCAATTTGCTGATCGAAACAAGCAAGAGTTCAATGATCTGACTTCTCATGACAACAAAAATGTTGTCTTTAGCACTGGTTTGGCTGATTCAATTGCGGTTAGAATGGTTCAAGACCAGTTTTCTCTCCCACCGGTTCTTGCAATGTTACGGATCGAAAAAAGAAATAGAATCAAATTGCATTCAAATTATGGTGTTCAGGATATGCAAAGCTTTTTAAATGATAAAACCGCTGACCCTGACAATCCTGGAAGGAGGGCTGCTAGCTTTATTGAAGACAATTATGATGCTGAGAATAAACAGAAAGATTCTGAGATGATTAACTTTGAAGTTAATGAACCTGTTGTCGTCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTGCTGTCCAACCCAATGGCTTCAGGAGGAGATAGTAGTGATGGAATAGGATGGCCTTATGTGGCATTTGATATTGACCCCAGGGTTGTAAAGGCAGCTAGAAAACAAGGTTTTCCTATTCTATATGGGGATGGATCACGTCCAGTTGTTCTTCAATCTGCCGGTATCTTTTCTCCAAAAGCTATCATGATTATGCTCACTGAGAAGAAGAAGTCGATTGAAGCTTTTCATAGGCTACGACTGGCTTTTCCTGCGGTTCCAATATACGCCAGAGCTCGAGATGTAAAACATCTTTTAGATCTGAAGAAAGCAGGTGCAACGGATGCTACTTTGGAAAAGGCCGAGACTAGCTTACAACTTGGTTCTAAGATGCTGAAAGGCCTCGGGATGATGTTCGGTGATGTATCATTTTTGAGTCAGCTTGTTAGAGATTCTATGGAGCTACAAACTGAAGAAGCAATCAGCCAACGAGAATACCGGGAATAA 1203 0.4048 MSQDYVENEKDFAPPPPKELEVEENEDHLYIPIAQDYVENEKELEGEEDNSSVPISQDSDREAIEAFNRWRQLFEVNYTLTTEEERRFKYFKNYFNRKVNPTMEIFGINLPQFADRNKQEFNDLTSHDNKNVVFSTGLADSIAVRMVQDQFSLPPVLAMLRIEKRNRIKLHSNYGVQDMQSFLNDKTADPDNPGRRAASFIEDNYDAENKQKDSEMINFEVNEPVVVLGFGQMGQVLANLLSNPMASGGDSSDGIGWPYVAFDIDPRVVKAARKQGFPILYGDGSRPVVLQSAGIFSPKAIMIMLTEKKKSIEAFHRLRLAFPAVPIYARARDVKHLLDLKKAGATDATLEKAETSLQLGSKMLKGLGMMFGDVSFLSQLVRDSMELQTEEAISQREYRE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06077 400 FunFam Glutathione-regulated potassium-efflux system protein KefB 222 395 - -
Trre1g06077 400 Gene3D - 222 394 - -
Trre1g06077 400 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 225 364 IPR036291 -
Trre1g06077 400 ProSiteProfiles RCK N-terminal domain profile. 224 357 IPR003148 GO:0006813
Trre1g06077 400 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 194 396 - -
Trre1g06077 400 Pfam TrkA-N domain 225 348 IPR003148 GO:0006813
Trre1g06077 400 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06077 Trre-Chr1 65011794 65017583 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06077 194 397 Inorganic Solute Cotransporters AT4G04850 63.235 9.57e-81 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06077 K03455 - gmx:100798214 312.768