Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g06044 ATGACTACTCTCACCTCAAATCTAAACCTTATCCCACAACATTCTAAAAATCATCAACAACACCAAAATTCTTCTATTGTTGAAGAAATTAAAGGCCTAATTAGAGTACACAAAGATGGTTACATAGAAAGACCAAATATTGTTCCATGTGTCACAACTGATTTATCTCCAAATTTGAATGTAATTTCTAGAGACATAATCATTGACAATGTTACAAATATTTGGGCACGTTTTTATGTTCCAAATTCTCAAATAAAAAAGTTACCTTTATTAGTGTATTTTCATGGTGGTGGTTTTTGTGTTGGTTCTGCAGCTTGGAGTTGTTACCATGAATTTCTTGCTATGCTATGTTCAAAAATTGGTTGCTTAATTATGTCAGTTAATTATAGATTAGCACCAGAAAATCCTCTTCCAGCACCATATGATGATGGTTTAAATTCACTAATATGGTTGAAAAAACAATTTTTATATCAAAATGAGAATAGTGAATTTTCATGGTGGACTAAAAAATGTAACTTTTCTAATGTCTTTTTAGGTGGTGATAGTGCAGGTGGTAACATAGCTTATAATGTTGCCAAAAGGGTAAATTTAAATTCATGTGAAGGTAATGTTTTAAGGCCTTTAAATTTAAAGGGTCTTATTTTGATACAACCATTTTTTGGTGGAAAAATAAGAACAGAATCAGAAAAATGTATAGCTGGTTCTGCTTTGAATTTGGTAGCATCTGATACTTATTGGCGATTAGCATTACCGTATGGCGAAGATCGTGATCATCCATGGTGTAATCCATTGGTGAAATTGGAAGAATTGAAGGTATTGATGATGCCTATGTTGGTTTGTATTTCTGAAATGGATATATTGAAAGATAGGAACTTGGAATTTTGTGATGCTTTGGAAAGTGTTGGTAAAAGGGTTGAATATGAAGTGTTTAAAGGTGTAGGACATGCTTTTCAGATTTTGAGTAAATCTCATGTTTCTAAAATAAGAGTTGTTCAAATGATGGATTGTGTCAAATCCTTCATGGATCTTTCATGA 1035 0.3198 MTTLTSNLNLIPQHSKNHQQHQNSSIVEEIKGLIRVHKDGYIERPNIVPCVTTDLSPNLNVISRDIIIDNVTNIWARFYVPNSQIKKLPLLVYFHGGGFCVGSAAWSCYHEFLAMLCSKIGCLIMSVNYRLAPENPLPAPYDDGLNSLIWLKKQFLYQNENSEFSWWTKKCNFSNVFLGGDSAGGNIAYNVAKRVNLNSCEGNVLRPLNLKGLILIQPFFGGKIRTESEKCIAGSALNLVASDTYWRLALPYGEDRDHPWCNPLVKLEELKVLMMPMLVCISEMDILKDRNLEFCDALESVGKRVEYEVFKGVGHAFQILSKSHVSKIRVVQMMDCVKSFMDLS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g06044 344 SUPERFAMILY alpha/beta-Hydrolases 24 324 IPR029058 -
Trre1g06044 344 Gene3D alpha/beta hydrolase 32 343 IPR029058 -
Trre1g06044 344 PANTHER ARYLACETAMIDE DEACETYLASE 28 322 - -
Trre1g06044 344 Pfam alpha/beta hydrolase fold 91 318 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g06044 Trre-Chr1 64711698 64712732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g06044 19 344 Carbohydrate Esterase AT5G16080 52.553 1.33e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g06044 - - gmx:100775824 489.96