Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05905 ATGGAATATTACGGGGTTGTGAGTTTGGTATTAGCCGTTTTGGTGTGGATTTGGTTGGCAATAGTGATGGAACATAAAAGATCGAAACTTAGTCATCAACTTCCACCTGGACCAAGATGTTGGCCAGTGGTTGGCAACATTTTCCAGATAGGTTTGTCACCTCCACACGAGTCCTTTACAATACTTGCTCATAAGCATGGTCCTATCATGACCCTTTGGCTAGGTTCTATGTGCACCGTCGTTGTCTCCTCGAGTGATGTAGCCTGTGACATGTTCAAAAACAACGATGTTGCTCTTGCTGGAAGGAAGATTTATGAAGCCATGAAAGGGAATCATGAGCATGGTAGTGAAGGTTCGCTCATAACTTCTCAATACAACGCACACTGGCGCATGCTGAAGCGCTTGAGCACCACCGAGTTCTTTGTCACAAGTCGCTTAGATGCTATGCGAGATGTGCGTGCAAAATGCATAGACCGTATGGTTCACTTGATAGATGAAGCTGCTTGTGAGTCTGGGAATGGTGTTGTTGATGTTGGCAGGTTCTTTTTCTTGATGGCTTTTAATCTCATTGGGAACCTTATATTCTCAAAGGACTTGTTAGACCCTGAAATGGAGAGAGGGGCTAGATTCTATCATCATACGGTTAAGGTTATGGAATATGCTGGGAAACCCAACGTTGCAGATTTCTTTCCTATATTGAAGAGGTTTGACCCTCAAAGTATAAGGAGAAACACACAGTTCCACGTTGAAAGAGCCTTTGAGATAGCAGGTTGGTTCATCAAACAAAGGATGGAAAATGATATGGTTGGCGGTGGAAATGGAAACAACAAAGACTTTTTGGATGTACTCTTGCAATTTCGCGGCGATAGTGTTGGTGGTCCCTATAGTTTTACTTCGAGAACTATTAACGTTGTTGTCTTTGAAATGTTCATTGCGGGGACAGACACGACAACAAGCACACTAGAATGGGCGATGGCGGAGCTTCTACACAACCCAAGAACGCTAAAGAAAGTGCAAATGGAACTAAGGAACAAAATAGCCAGAGGATATGGACATGACAGAGGGAATGGGACATTGAGAAAAGCTGTCCCTTTGAAAGCCATACCTGTGCCTTACAAAGGAACTCCAGTTGATGTTGCAGGGAAACAATAA 1152 0.4358 MEYYGVVSLVLAVLVWIWLAIVMEHKRSKLSHQLPPGPRCWPVVGNIFQIGLSPPHESFTILAHKHGPIMTLWLGSMCTVVVSSSDVACDMFKNNDVALAGRKIYEAMKGNHEHGSEGSLITSQYNAHWRMLKRLSTTEFFVTSRLDAMRDVRAKCIDRMVHLIDEAACESGNGVVDVGRFFFLMAFNLIGNLIFSKDLLDPEMERGARFYHHTVKVMEYAGKPNVADFFPILKRFDPQSIRRNTQFHVERAFEIAGWFIKQRMENDMVGGGNGNNKDFLDVLLQFRGDSVGGPYSFTSRTINVVVFEMFIAGTDTTTSTLEWAMAELLHNPRTLKKVQMELRNKIARGYGHDRGNGTLRKAVPLKAIPVPYKGTPVDVAGKQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05905 383 Gene3D Cytochrome P450 27 360 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05905 383 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05905 383 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05905 383 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05905 383 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05905 383 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 347 - -
Trre1g05905 383 SUPERFAMILY Cytochrome P450 28 348 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre1g05905 383 Pfam Cytochrome P450 35 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05905 Trre-Chr1 63513369 63515143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05905 6 344 Cytochrome P450 AT3G52970 59.605 2.58e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05905 - - tpra:123898388 654.44