Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05903 ATGGAAGCAACTAAGTTAATAGGTAACTCATTTGGTGATGAACTGACTAATGAGCTGATCTACCGCTATAACTTCTATGTTGCTTCGCTTAGGGAGAACGATATGACAACTGCAGCCTTACTTTTTAAGATACATCCAAATGGAGATTCGATTTTCACCGAAATTCCCCTCGCTGTAACTGACAGCAATAAACAGCGGAGAGGCTACATGCAGTTCTTAATGGGGCAGTTTGAAAAATTCTTAAGAAAATTAGGAGTAGGCAAAATGGTTCTCCCATCTATTAAAGATGCTCTTTGGTTCTGGGTCTATAAGGTTGGATTTGCCACAATGCCAAATTGGGAGCTAGATTCCTTTAAAAAAAAAATAAGGTTGTGCAGTTTAACGAGACTGTTATATGTTACAAACTAG 408 0.3824 MEATKLIGNSFGDELTNELIYRYNFYVASLRENDMTTAALLFKIHPNGDSIFTEIPLAVTDSNKQRRGYMQFLMGQFEKFLRKLGVGKMVLPSIKDALWFWVYKVGFATMPNWELDSFKKKIRLCSLTRLLYVTN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05903 135 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 109 IPR016181 -
Trre1g05903 135 Gene3D - 5 133 - -
Trre1g05903 135 PANTHER AUTOIMMUNE REGULATOR 25 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05903 Trre-Chr1 63506033 63506440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05903 12 114 PHD Transcription Factor Family AT5G63900 33.333 2.06e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05903 - K12862 hgl:101702044 31.187